Pairwise Alignments

Query, 321 a.a., transposase from Pseudomonas putida KT2440

Subject, 326 a.a., IS110-like element IS621 family transposase from Escherichia coli ECRC62

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 40/318 (12%)

Query: 11  GVDTSKDELVIQAAP-----NTKSFAIPNTPKA---IKAWLKTLPKGSA-LAIEATSTYH 61
           G+DT+K++L +          TK FA  NT K    + +WLK      A + IEAT TY 
Sbjct: 9   GIDTAKEKLDVDVLRPDGRHRTKKFA--NTTKGHDELVSWLKGHKIDHAHICIEATGTYM 66

Query: 62  MEMAEQAHAAGFAVYVIDGLRLSKYRESVAIRAKTDAHDAALLARFLSNERGSLKAWTPP 121
             +AE  + AG+ V VI+      + +S  +R KTD  DA +LA F   +R +  AW  P
Sbjct: 67  EPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPA--AWEAP 124

Query: 122 PAGHREIQVLLRRRAKLV-----------AVRGMLRMSLSGDKLF-ASELKRVEEVLERI 169
               R ++ L+ R   L              R + R S+    L+  +ELKR        
Sbjct: 125 HPLERALRALVVRHQALTDMHTQELNRTETAREVQRPSIDAHLLWLEAELKR-------- 176

Query: 170 ELSLEKQLRAVI-KKAGLSDQMRRVQRLPGVGFLTAAGLVMSF-MRGEFKNSDAFVAYLG 227
              LEKQ++ +      +  + + ++ +PG+G  T+A L+    ++  F ++  F A+ G
Sbjct: 177 ---LEKQIKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAYIGLKDRFAHARQFAAFAG 233

Query: 228 MDVTVSQSGKWA-GRGKLSKRGDSEVRRLLYNASMSGSRTATWKQYYAHH-QARGKKTTQ 285
           +     +SG    G  ++SK G   +RR LY  +M  +    W + +     A GKK   
Sbjct: 234 LTPRRYESGSSVRGASRMSKAGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKV 293

Query: 286 ALVILARRLARLAFGLMR 303
            L  + R+LA++A+G+++
Sbjct: 294 ILGAMMRKLAQVAYGVLK 311