Pairwise Alignments

Query, 321 a.a., transposase from Pseudomonas putida KT2440

Subject, 228 a.a., IS110 family transposase ISHne3 from Azospirillum sp. SherDot2

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 7/222 (3%)

Query: 77  VIDGLRLSKYRESVAIRAKTDAHDAALLARFLSNERGSLKAWTPPPAGHREIQVLLRRRA 136
           + D  R+  +  +   RAK D  DAAL+A F +++     A TPP     E+  L++ R 
Sbjct: 1   MFDPARVRYFARATGQRAKNDTIDAALIAEFTASQ--VALATTPPDPTREELADLVKARR 58

Query: 137 KLVAVRGMLRMSLSGDKLFA-SELKRVEEVLERIELSLEKQLRAVIK-KAGLSDQMRRVQ 194
            LV  R  LR + +G    A + L+   E L     +LE ++ + ++ +  L+D++  +Q
Sbjct: 59  LLVDKRVDLRHASAGAPAIAQAVLEEAVEGLTAAIATLEAEIHSRVEAQPELADRVAALQ 118

Query: 195 RLPGVGFLTAAGLVMSFMRGEFKNSDAFVAYLGMDVTVSQSGKWAGRGKLSKRGDSEVRR 254
             PGVG + A  L +          +   A +G+      SGK  G+  ++  G + VR 
Sbjct: 119 TAPGVGPVVATTLAILLPELGKTTGERMSALVGVTPFDYDSGKSRGKRHIA-GGRAAVRH 177

Query: 255 LLYNASMSGSRTATWKQYYAHHQA--RGKKTTQALVILARRL 294
            LY A+   +  +       H Q   RGK +   L    R+L
Sbjct: 178 ALYIAAEVAATHSKGAIVDVHLQLKWRGKPSRVTLTACMRKL 219