Pairwise Alignments

Query, 299 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 294 a.a., probable membrane protein STY1534 from Variovorax sp. SCN45

 Score =  188 bits (478), Expect = 1e-52
 Identities = 104/288 (36%), Positives = 156/288 (54%), Gaps = 18/288 (6%)

Query: 12  VLFTLKGSIVKRIALRCLMVTLLAALIVLVERHYPAYFYPVSATPFTLLGLSLSIFMSFR 71
           +LF  +GS++  I  + L  T  A L+ ++      +  P++  PF+L+GL+L+IF+ FR
Sbjct: 1   MLFVWRGSVLPDIVPQLLWTTAFAVLVTVLHGRLFQWKVPLNFVPFSLIGLTLAIFLGFR 60

Query: 72  NNACYDRWWEGRKAWGKLIIETRSFVRESVVITDETLRT-ELLRNLCGFAHALNARLRNE 130
           N+  Y R+WE R  WG L+ ETRS VR+++ + D           L  F HAL  +LR  
Sbjct: 61  NSTSYSRYWEARTLWGTLLNETRSLVRQALTLGDSPSHAGTAAARLIAFVHALRHQLRGT 120

Query: 131 DERAAARPWLARADAISPHNVCDGI----------LREIGEHCSRLAAQQQISEWRYNLL 180
           D  A     LAR   + P   C+ +          L  +GE         ++       +
Sbjct: 121 DPSAD----LAR---LLPPEDCERLRTARFKPAVLLLMVGEWLRDQRKSGRLDPMLAQAM 173

Query: 181 EQRLAGLTEVQATCERIKGTPLPFPYTLLLHRTIYIFCLLLPFALAEPLGWLAPLFTTIV 240
           E  L  LTE    CERI GTP+PF Y++++HRTIY++C+LLPF L + +G + P+    +
Sbjct: 174 EVPLGRLTEALGGCERIAGTPIPFTYSVIIHRTIYLYCVLLPFGLVDAIGAMTPVVVAFI 233

Query: 241 GYTFFGLDAIGNELEDPFGRDENDLPTDAMVRTVERDVLAGLGEQQLP 288
            YTFF L+A+G E+E+PFG   NDL  DAM R +E  +   +GE + P
Sbjct: 234 AYTFFALEALGAEIEEPFGTQPNDLALDAMSRMIESTLREMMGEPRSP 281