Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 371 a.a., ribonuclease D from Rhodanobacter sp000427505 FW510-R12

 Score =  186 bits (472), Expect = 9e-52
 Identities = 132/350 (37%), Positives = 183/350 (52%), Gaps = 13/350 (3%)

Query: 27  VAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQPLADLLEDSAVVKVLHACSE 86
           V +DTEFMR +TFYP+  L+Q+G   R  L+DPL       L   L   A V ++H+  E
Sbjct: 31  VGLDTEFMRRNTFYPQLALLQLGWNGRYALVDPLAFDIGAALQPRLGSGAAVTIMHSAGE 90

Query: 87  DLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPL 146
           DLE L  L  + P  LFDTQ+AA +  +G  + Y  LV E+ G+EL KGETRSDWLQRPL
Sbjct: 91  DLETLAPLLPEGPGQLFDTQIAAAFAGMGLGISYRALVAELAGVELDKGETRSDWLQRPL 150

Query: 147 SETQVSYAAEDAVHLAELFTVLRPRLS-DDKYAWVLEDGAEL-VAALRREVEPESLYRDV 204
           +++Q +YAA D V+L  L   L  RL   D+ AW  ED A L + A  RE +P+   R +
Sbjct: 151 TDSQRNYAALDVVYLKTLHEQLAERLQRRDRSAWHAEDCARLKLRASHREGDPQP-QRAL 209

Query: 205 KLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLWPMAKSQPNNLSALAKIDE 264
           + A    P Q A+LR L  WR+R AR  DVPR  +L +     +A+  P +L  L +   
Sbjct: 210 RGAADWPPAQQALLRRLLLWRDRSARRLDVPRPWLLDDALALNLAQQPPRSLGDLEQ-RS 268

Query: 265 MHPRTIR--QDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEAAGLLKQLRAIGQAEGERL 322
              R +R  Q GE L +L+    S       A +P     EA   L  ++ +       L
Sbjct: 269 RGQRALRSAQRGE-LFELLAATVSDEEIAATARIPGHPQGEAKKALAAMKTLVDHLAGEL 327

Query: 323 GIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERMGQALLDNLAG 372
            + P L+  +K LE  + +       + P+ L GWRRE + + L   L G
Sbjct: 328 DLPPGLLCPRKVLEEYVVT------TEWPEFLEGWRREVLHERLPALLPG 371