Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 382 a.a., Ribonuclease D from Xanthobacter sp. DMC5

 Score =  195 bits (496), Expect = 2e-54
 Identities = 124/370 (33%), Positives = 199/370 (53%), Gaps = 12/370 (3%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIG-NWQ 66
           I   ++LA  C    + PFV VDTEF+R  TF+PK  ++Q+     A LID L  G +  
Sbjct: 4   ITSTEALAAACERLARHPFVTVDTEFLRESTFWPKLCVVQVASPDEAILIDALSEGLDLA 63

Query: 67  PLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQE 126
           P   L+ +  V+KV HA  +D+E++      +P P+FDTQ+AA  L  G S+ Y +LVQ 
Sbjct: 64  PFYRLMGNERVMKVFHAGRQDIEIIWHQARLIPHPVFDTQVAAMVLGYGDSISYDQLVQR 123

Query: 127 VLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRL-SDDKYAWVLEDGA 185
            +G  L K    +DW +RPLS+ Q++YA  D  HL +++  L   L +  +  WV E+  
Sbjct: 124 TVGHSLDKSSRFTDWSRRPLSQAQITYAIADVTHLRDIYIKLTADLDARGRGEWVGEEMH 183

Query: 186 ELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSL 245
            L +    E  PE  +  +K   +  P++LAVL E+ AWREREA+ RD+PR R++K+  +
Sbjct: 184 VLTSPATYEQHPEQAWERLKSRVR-KPRELAVLVEVAAWREREAQTRDLPRGRVIKDEVI 242

Query: 246 WPMAKSQPNNLSALAKIDEMHPRTIRQD--GEFLIQLIKRAASLPAEQWP-APLPEPLPI 302
             +A  QP     LA++  + P+   +   GE +++ +KR  +   +  P     +PLP 
Sbjct: 243 GEIAVQQPQTPERLAELRSL-PKGFERSRYGEAVLEAVKRGVARDPKTLPRIERDKPLPN 301

Query: 303 EAAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERM 362
            A+  ++ L+ + +   E+  +A +++   + LE +  S   + P     +L+GWRRE  
Sbjct: 302 GASATVELLKVLLRMTAEQNAVAAKVIATTEDLERIAVSDEADVP-----ALKGWRRELF 356

Query: 363 GQALLDNLAG 372
           G   L   AG
Sbjct: 357 GVHALALKAG 366