Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 395 a.a., ribonuclease D from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 19/312 (6%)

Query: 3   IEIHWIRDDQSLAEHCRDWHQLPFVAVDTEF-MRVDTFYPKAGLIQIGDGQ-RAFLIDPL 60
           + I  I + + L E      +   +A+D EF     T+     L+QI D     ++IDP 
Sbjct: 11  VTIKLIEEQEQLLETLATLSRSQELALDLEFDQNRFTYGFNLCLVQIADENGTCYIIDPF 70

Query: 61  LIGNWQPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGY 120
            + + QPL DL ED  + K++H  + D+ +L +L   + + + DT +AA  LN   S   
Sbjct: 71  AVADLQPLFDLFEDGRITKIIHHSNNDILLLDKLGCNI-RGVMDTDVAAKILNYERS-SL 128

Query: 121 SRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSD-DKYAW 179
           + +++E   +E+ K +  S+W +RPL+E Q+ YAA D ++L  +   L   ++D  +  W
Sbjct: 129 ATVLKEEFDMEIDKSQQSSNWNKRPLTEAQLKYAAIDVIYLHRIKAKLVQEIADLGRLHW 188

Query: 180 VLEDGAELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRI 239
           + E+  +L+ AL    EPE+ +  +K A++L   Q  +L+ L A+R++ A   + P + +
Sbjct: 189 LQEEN-QLLEALTYS-EPENPHLKLKNAFRLNFYQQHILKHLFAFRDQMAMQFNKPASYV 246

Query: 240 LKEHSLWPMAKSQPNNLSA-LAKIDEMHPRTIRQDGE-FLIQLIKRAA----------SL 287
           +   +L  +A +   ++   L     +H    R   E  L+  +  A             
Sbjct: 247 ISNEALVELASTSNVDVHEWLNHTKGIHGGLKRSRNEKLLVDALSEARQSAKDNNISHDF 306

Query: 288 PAEQWPAPLPEP 299
           P+ +WP P+  P
Sbjct: 307 PSNRWPRPVRTP 318