Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 371 a.a., Ribonuclease D (EC 3.1.26.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  229 bits (585), Expect = 7e-65
 Identities = 137/364 (37%), Positives = 199/364 (54%), Gaps = 8/364 (2%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I  D +LA  C      P +A+DTEF+R  T+YP+ GLIQ+ DG    LIDPL I +W P
Sbjct: 2   IETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWSP 61

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
           L  +L D+ + K LHA SEDLEV L   G+LP+PL DTQ+ A +     S G++ +V+E 
Sbjct: 62  LKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEEY 121

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWVLEDGAEL 187
            G+ L K E+R+DWL RPLSE Q  YAA D  +L  +   L        +     D   L
Sbjct: 122 TGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECRL 181

Query: 188 VAALRREVE-PESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
           +   R+E++ PE  +RD+  AW+L  +QLA L+ L  WR R+AR RD+  N +++E +LW
Sbjct: 182 MQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENLW 241

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEAAG 306
            +A+  P +L  L  +  +    IR  G+ LI L+ +A +LP E  P PL   +  +  G
Sbjct: 242 AVARYMPGSLGELDSLG-LSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLM--DMPG 298

Query: 307 LLKQLRAIGQAEGERLG---IAPELMLRKKALEALLKSGYPNGPYQ-LPDSLRGWRRERM 362
             K  +AI     E      ++ EL+  ++ +  LL   +   P    P+ + GWR E M
Sbjct: 299 YRKAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELM 358

Query: 363 GQAL 366
            + L
Sbjct: 359 EEKL 362