Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 375 a.a., ribonuclease D from Enterobacter asburiae PDN3

 Score =  236 bits (603), Expect = 6e-67
 Identities = 139/368 (37%), Positives = 202/368 (54%), Gaps = 4/368 (1%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I  +  LA  C      P +A+DTEF+R  TFYP+ GLIQ+ DG+   LIDPL I +W P
Sbjct: 6   ITTNDELASLCEVTRDFPAIALDTEFVRTRTFYPQLGLIQMYDGKHVSLIDPLGITDWTP 65

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
           + DLL D+AV K LHA SEDLEV L   G +PQPL DTQ+ A + N   S G++ +V+E 
Sbjct: 66  MRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSNRPLSWGFAAMVEEY 125

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWVLEDGAEL 187
            G+ L K E+R+DWL RPL+E Q+ YAA D  +L  +   L        +     D   +
Sbjct: 126 TGLTLDKSESRTDWLARPLTERQLEYAAADVFYLLPIAGQLMKEAEASGWLSAALDECRM 185

Query: 188 VAALRRE-VEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
               R+E V+P+  +RD+  AW+L  +QLA L+ L  WR R+AR RD+  N +++E  LW
Sbjct: 186 TQQRRQEVVDPKEAWRDISNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLW 245

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEA-A 305
            +A+  P +L  L  I  +    IR  G+ L+ L+ +A  LP +  P PL   + +    
Sbjct: 246 AVARYMPGSLGELDSIG-LSGSEIRFHGKTLLALVAKAQELPEDALPEPLLNLMDMPGYR 304

Query: 306 GLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQ-LPDSLRGWRRERMGQ 364
              K ++A+ QA      ++ EL+  ++ +  LL   +   P   +P+ + GWR E M  
Sbjct: 305 KAFKDIKALVQAVATESKLSAELLASRRQINQLLNWHWKLKPQNGVPEMMAGWRGELMAD 364

Query: 365 ALLDNLAG 372
            L   L G
Sbjct: 365 RLNTLLDG 372