Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 371 a.a., ribonuclease D from Escherichia coli ECRC62

 Score =  234 bits (597), Expect = 3e-66
 Identities = 136/362 (37%), Positives = 202/362 (55%), Gaps = 4/362 (1%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I  D +LA  C      P +A+DTEF+R  T+YP+ GLIQ+ DG+   LIDPL I +W P
Sbjct: 2   ITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSP 61

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
           L  +L D ++ K LHA SEDLEV L + G+LPQPL DTQ+ A +     S G++ +V+E 
Sbjct: 62  LKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEY 121

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWVLEDGAEL 187
            G+ L K E+R+DWL RPL+E Q  YAA D  +L  +   L        +     D   L
Sbjct: 122 SGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRL 181

Query: 188 VAALRRE-VEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
           +   R+E V PE  +RD+  AW+L  +QLA L+ L  WR R+AR RD+  N +++E  LW
Sbjct: 182 MQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLW 241

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEA-A 305
            +A+  P +L  L  +  +    IR  G+ L+ L+++A +LP E  P P+   + +    
Sbjct: 242 SVARYMPGSLGELDSLG-LSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDMPGYR 300

Query: 306 GLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPY-QLPDSLRGWRRERMGQ 364
              K ++++     E   I+ EL+  ++ +  LL   +   P   LP+ + GWR E M +
Sbjct: 301 KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE 360

Query: 365 AL 366
           AL
Sbjct: 361 AL 362