Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 375 a.a., ribonuclease D from Escherichia coli BL21

 Score =  233 bits (595), Expect = 5e-66
 Identities = 136/362 (37%), Positives = 202/362 (55%), Gaps = 4/362 (1%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I  D +LA  C      P +A+DTEF+R  T+YP+ GLIQ+ DG+   LIDPL I +W P
Sbjct: 6   ITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSP 65

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
           L  +L D ++ K LHA SEDLEV L + G+LPQPL DTQ+ A +     S G++ +V+E 
Sbjct: 66  LKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEY 125

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWVLEDGAEL 187
            G+ L K E+R+DWL RPL+E Q  YAA D  +L  +   L        +     D   L
Sbjct: 126 SGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRL 185

Query: 188 VAALRRE-VEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
           +   R+E V PE  +RD+  AW+L  +QLA L+ L  WR R+AR RD+  N +++E  LW
Sbjct: 186 MQMRRQEVVAPEDAWRDMTNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLW 245

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEA-A 305
            +A+  P +L  L  +  +    IR  G+ L+ L+++A +LP E  P P+   + +    
Sbjct: 246 SVARYMPGSLGELDSLG-LSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDMPGYR 304

Query: 306 GLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPY-QLPDSLRGWRRERMGQ 364
              K ++++     E   I+ EL+  ++ +  LL   +   P   LP+ + GWR E M +
Sbjct: 305 KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE 364

Query: 365 AL 366
           AL
Sbjct: 365 AL 366