Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 385 a.a., Ribonuclease D from Alteromonas macleodii MIT1002

 Score =  218 bits (556), Expect = 2e-61
 Identities = 127/340 (37%), Positives = 197/340 (57%), Gaps = 8/340 (2%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I   + L + C    +   VA+DTEF+R  T  P  GLIQ+ DG +  LIDPL I N QP
Sbjct: 6   ITTSEQLEKVCTAAQRQEAVALDTEFVRTKTLTPHLGLIQLYDGHQLVLIDPLAIDNMQP 65

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
             DL+E++ VVKVLH+CSED+E  L     +P P+FDTQLA   L++G S+GY++LV+ +
Sbjct: 66  FIDLMENTEVVKVLHSCSEDIEAFLTAFDTVPTPVFDTQLAGSILDMGPSLGYAKLVELL 125

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSD-DKYAWVLEDGAE 186
             I L KGE+R+DWL RPL E Q+SYAA D ++L   +  L  ++ +  K  W+ ++ A 
Sbjct: 126 CDISLDKGESRTDWLARPLREAQLSYAANDVLYLLPCYQQLASKVQEAGKVHWIYQEIAL 185

Query: 187 LVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
           LV   R ++  +  Y  +K  W+L  +QL VL+ L AWR   AR +D+  N + KE  L+
Sbjct: 186 LVDKKRAQMPEDFAYLSIKNNWRLNSEQLTVLQALAAWRLNTARKKDLALNFVFKEGHLF 245

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPIEAAG 306
             A+   ++ S L++I+ ++ +++R+ G+ +I LI+ A +  A Q P  L  P+ +    
Sbjct: 246 EAAQRLIDSKSGLSRINGVNHQSVRRYGDTIITLIEEARAKYA-QTPEKLRLPVVLRLID 304

Query: 307 LLK------QLRAIGQAEGERLGIAPELMLRKKALEALLK 340
           + K      +L+ I     +   +  +++  KK L  LLK
Sbjct: 305 IAKYKKTLAELKVISDQIAKDNAVNSDVIASKKQLNQLLK 344