Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 9/265 (3%)

Query: 1   MNLRFLETFVWVARLKSFRLTAEKLFTTQASVSSRIAALEADLGVKLLLRDSRGVSLTPE 60
           M +R LE  V VAR   F   AE    +Q  +S+ I  LE +LG+ L++R  R + LT E
Sbjct: 1   MFMRQLEYLVAVAREGHFGRAAEACRVSQPGLSAGIRKLEEELGLPLVIRSHRFLGLTLE 60

Query: 61  GSKVLEYAERMLETAKAMKQSL-DSDRAKVGRIRIGVMDTVIHTWMSALVAELTERYPQV 119
           G +VL +A+RM+     M+Q L D+     G +RIG +   I   + ALV     RYP V
Sbjct: 61  GERVLAWAQRMVADYNGMRQDLSDASSGLSGTLRIGAIPAAIPA-LPALVNGFCARYPNV 119

Query: 120 EIELVADTALNLREQLQKGFLDVILQTDLLREQ---SIRSLDLARYPMGWVVAAGAHQHR 176
            ++L++  +  ++  L    LD+         +    +RS+ L      +V AAGA   R
Sbjct: 120 RVQLLSLASTAIQRGLDT--LDIDAGVTYFENEPLARVRSIALYDETYVFVTAAGAFSGR 177

Query: 177 DYASLAELGRERIITFSKNSRPHQEVLSLLQAAG-AEAPRLNCVNSVAAITRLLRDGFGI 235
           +    +E     +   + + +  + V  +L  AG A  PR+   N+   +  L+R G   
Sbjct: 178 NAIGWSEAAAHPLCLLTSDMQNRRIVDRILAEAGVASNPRIE-ANTFLGVWSLVRSGAWS 236

Query: 236 GALPPALVDAELGRGELVLLEGLQP 260
           G +P   ++       LV L  + P
Sbjct: 237 GIVPHTYLETFEAPDHLVALPLVDP 261