Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 756 a.a., Clp protease ClpX from Pseudomonas simiae WCS417

 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 30  LVKGEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVH 89
           L  G  G GKT  A QLA + G  L+ + +    + H        VSRL  +  G     
Sbjct: 496 LFAGPTGVGKTEAARQLAKAMGIELVRFDMSEYMERH-------TVSRLIGAPPGYV--- 545

Query: 90  DVRNYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQELDKMEFYVYEIDETIKAK 149
               + + G L EA       +LL+DEI+KA  E  N LLQ +D         +   KA 
Sbjct: 546 ---GFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMD---HGTLTDNNGRKAD 599

Query: 150 QRPIIIITSNN 160
            R +I+I + N
Sbjct: 600 FRNVIVIMTTN 610



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PLLV GE G GKT +AE LA
Sbjct: 214 PLLV-GEAGVGKTAIAEGLA 232