Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 774 a.a., ATPase, AAA family from Variovorax sp. SCN45

 Score = 41.6 bits (96), Expect = 6e-08
 Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 47/198 (23%)

Query: 5   GTRDYVATDDLKLAVNAAITLERPLLVK-------------GEPGTGKTMLAEQLAASFG 51
           G R  V T DL + +N     E P + +             G PGTGKT LAE +A + G
Sbjct: 531 GERRSVTTYDLDM-LNVETRFEIPRIAQALKARGHGTLCFYGAPGTGKTALAEHIAKALG 589

Query: 52  ARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVHDVRNYLKKGKLWEAFEADERVI 111
             L+          + G  E +  +  R+++                        +E+ +
Sbjct: 590 RPLLVKQASDLMSKYVGETEQNMAAMFREAE------------------------NEKAV 625

Query: 112 LLIDEIDKADIEFPNDLLQELDKMEFYVYEIDETIKAKQR--PIIIITSNNEKELPDAFL 169
           LL+DE D     F  D  +   +  + V E++E ++  +R   + + T+N    L  A L
Sbjct: 626 LLLDEAD----SFLQD--RRGAQRTYEVTEVNEMLQGMERFNGVFVCTTNLLDRLDQAAL 679

Query: 170 RRCFFHYIAFPDRTTLQQ 187
           RR F   I F   T +Q+
Sbjct: 680 RR-FTFKIKFMPLTAVQR 696



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 41/210 (19%)

Query: 19  VNAAITLERP---LLVKGEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAV 75
           + AA+  + P   +L+ G PGTGKT LA+ +A + G                 L+E +  
Sbjct: 301 LRAAVARKEPGVNVLLYGPPGTGKTELAKVVAQAAGLE---------------LFEVEYA 345

Query: 76  SRLRDSQLGVDKVHDVRNYLKKGKLWEAF-EADERVILLIDEIDKADIEFPNDLLQELDK 134
            R  +S  G D+   +       ++ + F +   +  LL DE++        +  Q + +
Sbjct: 346 DRDGNSLSGRDRYRSL-------QIAQVFLKGSAQAALLFDEVEDVFPPISTEAAQFMAR 398

Query: 135 MEFYVYE----------IDETIKAKQRPIIIITSNNEKELPDAFLRRCFFHY-IAFPDRT 183
            E               +++ ++A   P + +T N  +++  AF RR  +H  +  P   
Sbjct: 399 AEQIPAPTSGSVSGKAWVNQILEANPVPTLWVT-NRIEQIDPAFRRRFAYHLELKSPPPG 457

Query: 184 TLQQIVDVHYPNISQSLVSEALDVFFDVRK 213
             +Q+V      +   +VSEA       RK
Sbjct: 458 AREQLVK---KTLEGVVVSEAFTAKLAERK 484