Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

 Score = 44.7 bits (104), Expect = 7e-09
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 30  LVKGEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVH 89
           L  G  G GKT  A+QLA   G  LI + +    + H       AVSRL  +  G     
Sbjct: 500 LFSGPTGVGKTEAAKQLAYIMGIELIRFDMSEYMERH-------AVSRLIGAPPGYV--- 549

Query: 90  DVRNYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQELDKMEFYVYEIDETIKAK 149
               + + G L EA       +LL+DEI+KA  +  N LLQ +D         +   KA 
Sbjct: 550 ---GFDQGGLLTEAVTKKPHAVLLLDEIEKAHPDIFNVLLQVMD---HGTLTDNNGRKAD 603

Query: 150 QRPIIIITSNN 160
            R +III + N
Sbjct: 604 FRNVIIIMTTN 614



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PLLV GE G GKT +AE LA
Sbjct: 218 PLLV-GEAGVGKTAIAEGLA 236