Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 278 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Alteromonas macleodii MIT1002

 Score =  416 bits (1070), Expect = e-121
 Identities = 201/278 (72%), Positives = 235/278 (84%)

Query: 1   MKFEGTRDYVATDDLKLAVNAAITLERPLLVKGEPGTGKTMLAEQLAASFGARLITWHIK 60
           M F GT +Y+AT DL+LAVNAAITLERPLL+KGEPGTGKTMLAE+LA S G  LI WHIK
Sbjct: 1   MAFSGTSNYIATKDLQLAVNAAITLERPLLIKGEPGTGKTMLAEELAESLGTELIQWHIK 60

Query: 61  STTKAHQGLYEYDAVSRLRDSQLGVDKVHDVRNYLKKGKLWEAFEADERVILLIDEIDKA 120
           STTKA QGLYEYDAVSRLRDSQLG D+VHD+ NY+ KGKLWEAF A++R +LLIDEIDKA
Sbjct: 61  STTKAQQGLYEYDAVSRLRDSQLGDDRVHDISNYIVKGKLWEAFSAEKRPVLLIDEIDKA 120

Query: 121 DIEFPNDLLQELDKMEFYVYEIDETIKAKQRPIIIITSNNEKELPDAFLRRCFFHYIAFP 180
           DIEFPNDLL ELDKMEF+VYE  E + AKQRPI+IITSNNEKELPDAFLRRCFFHYI FP
Sbjct: 121 DIEFPNDLLLELDKMEFFVYETQERVVAKQRPIVIITSNNEKELPDAFLRRCFFHYIQFP 180

Query: 181 DRTTLQQIVDVHYPNISQSLVSEALDVFFDVRKVPGLKKKPSTSELVDWLKLLMADNIGE 240
           +   +Q+IV+VH+P++ + L+ EAL  FF++R VPGLKKKPSTSEL+DWLKLL+A++I  
Sbjct: 181 NPEEMQEIVNVHFPDLKKKLLDEALKAFFEIRDVPGLKKKPSTSELIDWLKLLVAEDIPP 240

Query: 241 AVLRERDPTKAIPPLAGALVKNEQDVQLLERLAFMSRR 278
             L  +D   AIPPL GAL+KNEQD+ L E+L FM+RR
Sbjct: 241 EALHSKDGKAAIPPLYGALLKNEQDIHLFEKLVFMARR 278