Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 836 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 33  GEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVHDVR 92
           G  G GKT +A+QLAAS G  ++ + +    + H        VSRL  +  G        
Sbjct: 512 GPTGVGKTEVAKQLAASLGVEMLRFDMSEYMERH-------TVSRLLGAPPG------YV 558

Query: 93  NYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQELD 133
            + + G L +  +     ++L+DEI+KA  +  N LLQ +D
Sbjct: 559 GFDQGGLLTDGVDQHPHSVVLLDEIEKAHPDIYNILLQVMD 599



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PL V G+PG GKT +AE LA
Sbjct: 227 PLYV-GDPGVGKTAIAEGLA 245