Pairwise Alignments

Query, 293 a.a., putative metabolite efflux pump from Pseudomonas putida KT2440

Subject, 317 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 21/292 (7%)

Query: 13  ATTCLFVLLWSSGAIVSKLGLAHASPFAFLLLRSALALAGLLLIGPLLGLRWPRTRGSIL 72
           A   +    W +     K+G+A   P   +  R+ +A A LL +  + G+R P+      
Sbjct: 22  ALLAVLATCWGASYTFIKIGVATIPPVTLIAARTLIAGALLLAVLRMRGVRLPKEPAMWG 81

Query: 73  RALGTGCVLLGAYQIFYLLA-LDTHVTPGVMATVMGVQPILTVVL-----MERQRSWSRL 126
           R     C  L +   F L+A  +  V  G+   +    PI   +L        + +  R 
Sbjct: 82  RFAVQAC--LNSVLPFTLIAWAERSVDAGLATILNSTSPIFIFLLGLGMGSAGRPTLQRF 139

Query: 127 FGLGLGLGGLIMVV-YQGINLGGVSLAGMLFALLALV----SMTFGSILQKRITDNPMGT 181
           FG+G GL G+ ++V  + +N  G SL   L  + A V    +  FG + +     +PM  
Sbjct: 140 FGVGAGLAGICLIVGLEALNGLGHSLLAQLALVAAAVCYGCAAMFGRVFKGL---DPMVP 196

Query: 182 LPLQYLAGFAM---CALFAPLQPLHVEWTGSFVGALLWMGLVVSLLATLLLYRLIAKGNL 238
                L+G AM    +LF   +P  +  + + VGA+L + ++ + LA  + +RLI     
Sbjct: 197 AAGSMLSGTAMLLPASLFID-RPWTLAPSAASVGAVLALAVLSTALAFTIYFRLIRTLGP 255

Query: 239 VNVTSLFYLVPAVTAVMDLLIFGNRLAPLSLLGMGLIVVGLLFVFRKPAARL 290
           ++ ++  YL   +   + +L  G  LAP + +G+G +V G++     P A+L
Sbjct: 256 MSTSAQAYLRVPIGVAIGVLFLGETLAPTAWIGLGCVVAGVV-AMTMPEAKL 306