Pairwise Alignments

Query, 293 a.a., putative metabolite efflux pump from Pseudomonas putida KT2440

Subject, 287 a.a., regulator protein pecM from Agrobacterium fabrum C58

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 81/285 (28%), Positives = 124/285 (43%), Gaps = 41/285 (14%)

Query: 7   TSVASAATTCLFVLLWSSGAIVSKLGLAHASPFAFLLLRSALALAGLLLIGPLL--GLRW 64
           T  A    T L   +W +   V+   L    P    +LR+  A   LLL+   L  G+ W
Sbjct: 6   TYAADVLVTALAPAIWGTTYFVTTEFLPQGYPLHVAMLRALPAGILLLLLVRKLPQGIWW 65

Query: 65  PRTRGSILRALGTGCVLLGAYQIFY-LLALDTHVTPG-VMATVMGVQPILTVVLMERQRS 122
           PR+   IL AL         +  F+ +L +  +  PG V ATV  VQP++ + L      
Sbjct: 66  PRS--FILGALN--------FSFFWAMLFVSAYRLPGGVAATVGAVQPLIVIGL------ 109

Query: 123 WSRLF----------GLG-LGLGGL-IMVVYQGINLGGVSLAGMLFALLALVSMTFGSIL 170
            SRLF          G G LG+ G+ ++V+  G  L G+ +A     L   VSM FG++L
Sbjct: 110 -SRLFLSTPVRPLAIGAGFLGIAGVALLVLTPGAALDGIGVAA---GLAGAVSMAFGTVL 165

Query: 171 QKRITDNPMGTLPLQY----LAGFAMCALFAPLQPLHVEWTGSFVGALLWMGLVVSLLAT 226
            ++    P+  L          G  +  +   L+P     T   V  + ++GL+ + L  
Sbjct: 166 TRKWRP-PVSNLTFTAWQLTAGGILLLPVAYALEPALPAPTAVNVMGMAYLGLIGAALTY 224

Query: 227 LLLYRLIAKGNLVNVTSLFYLVPAVTAVMDLLIFGNRLAPLSLLG 271
           LL +R +A+       SL +L P V  ++  L  G  LAP  + G
Sbjct: 225 LLWFRGLARIEPSAAASLGFLSPVVATLLGWLALGQSLAPAQIAG 269