Pairwise Alignments

Query, 406 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 220 a.a., RNA polymerase ECF-type sigma factor from Variovorax sp. SCN45

 Score = 43.1 bits (100), Expect = 8e-09
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 1   MRAEVEAVYRQESRRILATLIRLLGDFDLAEEAMHDAFFIAVERWQRDGIPANPRAWLVS 60
           ++A + A Y+   RR    L R LG  DLA E +HDA+    ER  R+  PANP A++  
Sbjct: 66  LQAHLAANYQALHRR----LERQLGCADLASECLHDAWLRLGERQPRE-TPANPDAYIYR 120

Query: 61  VGRFKAIDALRRRVRF 76
           V    A+D +R R R+
Sbjct: 121 VACNLAMDGMRERKRW 136