Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 567 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  516 bits (1330), Expect = e-151
 Identities = 267/563 (47%), Positives = 376/563 (66%), Gaps = 17/563 (3%)

Query: 6   WNDKRPAGVPSTID--INAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFA 63
           W +    GVP+ ID  I  Y S+ EVF    ++F +R A+ ++G  ++YA+ +    AFA
Sbjct: 13  WLNAYLPGVPADIDAGIEDYPSLREVFLEHLEKFRERVAYVSIGTEMTYADWQVQGVAFA 72

Query: 64  AWLQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGA 123
           AWLQ    ++ GER+A+ MPN LQYPI + G + AG +VVN NPLYT  E++H  KDSGA
Sbjct: 73  AWLQGQ-GVRKGERVALMMPNCLQYPICLLGTILAGAVVVNVNPLYTSHELKHLLKDSGA 131

Query: 124 RALVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQ 183
             +V    F   +++V+  + ++ ++ A +GDLL   KG  +N ++ +++K VPA+ LP 
Sbjct: 132 ETVVIFENFAHTLEKVITGSSVKRVVIAAIGDLLGTFKGAAMNFILRRVQKQVPAFNLPG 191

Query: 184 AVPFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACF 243
           +V F QVL++GR L+  PV ++LD +A LQYTGGTTG AKG ML+H N++AN+LQ  A  
Sbjct: 192 SVRFNQVLKQGRALNHFPVEMHLDALAFLQYTGGTTGDAKGVMLSHRNIIANLLQAKAWV 251

Query: 244 SQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKEL 303
                 G +L +D QE  +  LPLYHI++ T NC+  M  G  N+LI NPRD+      L
Sbjct: 252 ------GDQLDQDKQETNVTLLPLYHIFSLTVNCLMFMCLGGRNILIANPRDVKRVQMIL 305

Query: 304 GKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVE 363
            K RF+ + G+NTLF  L+++  F   DFS L++  +GG A   A A+RW+++TG  I+E
Sbjct: 306 RKERFNGIAGVNTLFNGLLENEAFCARDFSDLRMVIAGGMATHTAVAKRWKEVTGLPIIE 365

Query: 364 GYGLTETSPVASTNPYGQLARL------GTVGIPVAGTAFKVIDDDGNELPLGERGELCI 417
           GYGLTE SPV S +P   +AR+      G++G+P+  T  + + +DG    +GE+GEL +
Sbjct: 366 GYGLTECSPVVSISPI-DIARMREMEFTGSIGVPLPSTWVRFVREDGELAEIGEQGELQV 424

Query: 418 KGPQVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPN 477
           +GPQVM+GYWQ+PEATA+ LDAEGW  TGDI V+D  G+ R+VDRKKDMI+VSGFNVYPN
Sbjct: 425 RGPQVMQGYWQRPEATAEVLDAEGWLSTGDIGVMDARGYIRLVDRKKDMILVSGFNVYPN 484

Query: 478 EIEDVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPK 537
           EIEDVV  HP VA  AAIGV D  +GE VK+ VV ++  L+ +++ A+C+   TGYK+PK
Sbjct: 485 EIEDVVALHPAVAEVAAIGVEDGVTGEKVKIIVVRKDPNLTQEQILAHCREYLTGYKMPK 544

Query: 538 HIVLRES-LPMTPVGKILRRELR 559
           ++  R + LP T VGK+LRR LR
Sbjct: 545 YVEFRTTELPKTTVGKVLRRALR 567