Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 565 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  242 bits (617), Expect = 3e-68
 Identities = 171/579 (29%), Positives = 277/579 (47%), Gaps = 51/579 (8%)

Query: 5   FWNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAA 64
           FW    P  +P +I + A  S+      S  R+ D+PA    G  LSY +    +   A 
Sbjct: 9   FW----PKRLPHSITVPA-TSLWHNLATSAARYPDKPALVFFGRVLSYRDFAEQAERLAG 63

Query: 65  WLQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGAR 124
            L     +K G+R+ + M N  Q  IA F  +RA  +VV  NP+    E++H   D  A+
Sbjct: 64  ALHA-LGVKRGDRVILDMQNCPQLVIAHFAILRANAVVVPVNPMNRAEELKHYITDPDAK 122

Query: 125 ALVYLN----MFGKRVQEVLPDTGIEYLIEAKMGDLL-----------PAAKGWLVNTVV 169
             +          K    + P+  + ++I  +  D             PA K WL     
Sbjct: 123 VAIITGDLAAELAKASDALPPEQRLSHMIVTQFTDAFDADVSGDDAPAPAWKEWLTT--- 179

Query: 170 DKLKKMVPAYRLPQAVPFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTH 229
              +  +PA    Q + +   L          V  N  D+A+L YT GTTGL KG +  H
Sbjct: 180 ---RHPLPALAGGQVMAWTDALAANHPAPAHVVGAN--DMALLPYTSGTTGLPKGCVHHH 234

Query: 230 GNLVANMLQVLACFSQHGPDGQKLLKDGQE-VMIAPLPLYHIYAFTANCMCMMVTGNHNV 288
            +L+ N +            GQ       E V++A +P++HI    +     ++     +
Sbjct: 235 SSLMHNAMA-----------GQLWGGSTSEAVVLAVVPMFHITGVVSMMHTAVLAAATLI 283

Query: 289 LITN-PRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVK 347
           ++    RD+ G +  + +W+ +A   + T+ + LM  P F   D S++     GG A+ +
Sbjct: 284 IMPRWDRDVAGRL--ISRWKVTAWTNIPTMVIDLMASPNFASYDLSSMNYIGGGGAAMPQ 341

Query: 348 ATAERWEDLTGCRIVEGYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDG-NE 406
           A A+R  +  G +  EGYGLTET+  + TNP     +   +GIP   T  +V+D D   E
Sbjct: 342 AVAQRLLEQYGLKYQEGYGLTETAAPSHTNPSDH-PKQQCLGIPFMSTDARVVDPDTLAE 400

Query: 407 LPLGERGELCIKGPQVMKGYWQQPEATAQAL---DAEGWFKTGDIAVIDPDGFTRIVDRK 463
           +P+GE GE+ I GP+V +GYW++P+ATA A    + + +F++GD+  +D +G+  I DR 
Sbjct: 401 MPIGESGEIIIHGPEVFQGYWKRPDATAAAFVEFEGKRFFRSGDMGRMDEEGYFFITDRL 460

Query: 464 KDMIIVSGFNVYPNEIEDVVMGHPKVANCAAIGVPDERSGEAVKLFVVPR--EGGLSVDE 521
           K MI  SGF V+P E+E ++  HP +     I   D+  GE+VK  VV R      +  E
Sbjct: 461 KRMINASGFKVWPAEVELLMFRHPAIQEACVISTKDDYRGESVKAVVVLRATHKDTTEQE 520

Query: 522 LKAYCKANFTGYKVPKHIVLRESLPMTPVGKILRRELRD 560
           +  +C+ N   YK+P+ +   ++LP +  GK++ R L++
Sbjct: 521 IIDWCRENMAVYKIPRKVQFVDALPKSGSGKVMWRLLQE 559