Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  326 bits (836), Expect = 1e-93
 Identities = 194/562 (34%), Positives = 304/562 (54%), Gaps = 16/562 (2%)

Query: 6   WNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAW 65
           W    P G+    ++     V ++ + +  R+ +  A   +G  ++Y +L       A  
Sbjct: 16  WTHHYPPGMRWDAELPV-KPVQQMLDEAVARWPEHSAVEFMGQVITYRQLGAAVERAAKG 74

Query: 66  LQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARA 125
           LQ    +KPG  + + +PN   YPIA F  ++AG  VVN +PL  ER + H+ +DS    
Sbjct: 75  LQD-LGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLAHKIEDSRTDI 133

Query: 126 LVYLNMFG--KRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQ 183
           L+ L++     ++  +L  + +  L+   +GD    A G  V   +    ++ P     +
Sbjct: 134 LITLDLVNLYPQMARLLDSSRLRKLVVGSLGDY--GAAGDKVQAQLQGAGQIAPVPTDDR 191

Query: 184 AVPFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACF 243
            + F  +L+        P+    ++I VLQYTGGTTGL KGAMLTH NL +   Q     
Sbjct: 192 HLRFTDLLKSEGTHQTHPLGDLTEEIVVLQYTGGTTGLPKGAMLTHANLTSASAQYYEST 251

Query: 244 SQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKEL 303
               P    +L +G E  +  LPL+HI+A +A  +  +  G   VL T   D+   + EL
Sbjct: 252 KGDPP----ILDEGSERFLVVLPLFHIFALSAAMLLGVRLGAALVLHTR-FDVDAVMNEL 306

Query: 304 GKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVE 363
              R S   G+ T++ A++ HP  +++D  +LK   SGG  L     +R+  LTGC + E
Sbjct: 307 AASRISVFPGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFALTGCHLNE 366

Query: 364 GYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVI--DDDGNELP-LGERGELCIKGP 420
           G+G+TETSPV +  P   + + G+ G+P+     K++  DD   ++   GE GELCIKGP
Sbjct: 367 GWGMTETSPVGTFTPARGVRKAGSCGMPLPQVRIKLVSLDDPSKDVTAFGEAGELCIKGP 426

Query: 421 QVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE 480
            VMKGYW  P+ATA+++  +G+F++GD+A +D DG+  IVDR KDM++  G+NVYP  +E
Sbjct: 427 NVMKGYWNNPKATAESMTPDGYFRSGDVAKMDADGYFYIVDRTKDMLLCGGYNVYPRVLE 486

Query: 481 DVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREGG--LSVDELKAYCKANFTGYKVPKH 538
           + V  HP VA    IG+PDE  G++ K FV  +EG   L++D LKA+ K     +++   
Sbjct: 487 EAVYEHPAVAEVCVIGIPDEYRGQSPKAFVKLKEGAGELTLDALKAFLKDRLGKHEMIGA 546

Query: 539 IVLRESLPMTPVGKILRRELRD 560
           + +R  LP T VGK+ +++L D
Sbjct: 547 LEIRAELPKTAVGKLSKKDLVD 568