Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  511 bits (1315), Expect = e-149
 Identities = 271/557 (48%), Positives = 353/557 (63%), Gaps = 10/557 (1%)

Query: 11  PAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHT 70
           PAGVP  I    Y S+  +FE +  R+ADRP    +   +S+ EL+  S A  AWLQ   
Sbjct: 10  PAGVPHEIHPEQYRSLPHMFEEAFGRYADRPFSVCMERWMSFGELDTLSKALGAWLQSR- 68

Query: 71  DLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLN 130
            L+PG R+A+ +PN+ Q+ + + G +RAG   VN NPLYT RE+ HQ KDSGA A+V L 
Sbjct: 69  GLEPGARVAIMLPNIPQFAVTMCGVLRAGYTCVNVNPLYTARELEHQLKDSGATAIVILE 128

Query: 131 MFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLP-----QAV 185
            F   +++V+  T +++++   MGDLL    G  +   V  L K+VP Y+LP        
Sbjct: 129 NFASTLEKVIERTPVKHVVMTSMGDLLGGLYGAWITIAVRHLAKIVPPYKLPLSDGRSVT 188

Query: 186 PFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQ 245
           PF Q + EGRG    P    LD IA LQYTGGTTGL+KGA+LTH N+VA  LQ  A F+ 
Sbjct: 189 PFTQAITEGRGRPLGPDQSTLDSIAFLQYTGGTTGLSKGAVLTHRNIVAATLQAEAWFTP 248

Query: 246 HGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGK 305
                  L K      IA LPLYHI+A T  C+  +  G+H  LI NPRD   FI  L K
Sbjct: 249 ALTRAGDLSKVNS---IAALPLYHIFALTL-CLLAIRQGSHMTLIPNPRDFNKFIAVLKK 304

Query: 306 WRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGY 365
             F  L  +NTLF AL+ HP F+ LDFS L V+ +GG A  + TA +W + TGC ++EG+
Sbjct: 305 RPFHMLPAVNTLFNALLMHPEFKSLDFSTLFVSQAGGMAASEGTARKWFETTGCPMIEGW 364

Query: 366 GLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKG 425
           G++ET  + + NP       GT+G+P+      + DD+GN LP+GE GELCI+GP VM G
Sbjct: 365 GMSETCAIGTNNPVSNTEFTGTIGLPLPSIEIAIKDDEGNSLPVGESGELCIRGPNVMVG 424

Query: 426 YWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMG 485
           Y+ QP  TA A  A+G+ +TGDIAV+  DG++RIVDRKKDMI+VSGFNV+PNE+E+V+  
Sbjct: 425 YYNQPAETAAAFTADGFMRTGDIAVMQEDGYSRIVDRKKDMILVSGFNVFPNELENVISL 484

Query: 486 HPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIVLRESL 545
            P V  CAA+GVPDE+ GEA+K+FVV R+  L+ D +  YC +  TGYK PKHI  RESL
Sbjct: 485 CPGVVECAAVGVPDEKQGEAIKVFVVRRDPALTEDAVLQYCHSQLTGYKRPKHIEFRESL 544

Query: 546 PMTPVGKILRRELRDIA 562
           P T VGKILRRELR  A
Sbjct: 545 PKTNVGKILRRELRTSA 561