Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score =  592 bits (1527), Expect = e-173
 Identities = 299/558 (53%), Positives = 396/558 (70%), Gaps = 8/558 (1%)

Query: 6   WNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAW 65
           W    P GVPS I  +A AS++++ E+SCK+FADR AFS++G +L+Y EL+  + A AAW
Sbjct: 18  WLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVAAW 77

Query: 66  LQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARA 125
           LQ    L+ G+R+AV MPN+LQ P+AV+G +RAG++VVN NPLYT RE+ HQ KDSGA+A
Sbjct: 78  LQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGAKA 136

Query: 126 LVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAV 185
           L  L  F    Q+ +P T + +++ A MGDLL   KG +VN VV K+KK+VPA+ +P ++
Sbjct: 137 LFVLENFAHVAQQAVPKTAVRHVVVAAMGDLL-GLKGHIVNLVVRKVKKLVPAHAIPGSI 195

Query: 186 PFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQ 245
            FK +L+EG+G+S KPV L   DIA LQYTGGTTG++KGA+LTH NL+AN  Q+ + +  
Sbjct: 196 SFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQI-SLWLD 254

Query: 246 HGPDGQKLLKDGQEVM--IAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKEL 303
              +G+K   D  EV+  I  LPLYHI+A T N +  +  G HN+LI NPRDIPGF+KEL
Sbjct: 255 AAFNGRK---DRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKEL 311

Query: 304 GKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVE 363
             ++     GL TLF ALM++  FR+LD S+L     GG A+ +  AERW  + GC I E
Sbjct: 312 SHYQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITE 371

Query: 364 GYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVM 423
           GYGL+ETSPVA+ N        GT+G+P++ T   + D+DGN LP GE GE+CI+GPQVM
Sbjct: 372 GYGLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVM 431

Query: 424 KGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVV 483
            GYWQ+P+ TA+A+ A+G+F++GD+  +D  G+T+IVDRKKDMI+VSGFNVYPNE+E+V 
Sbjct: 432 AGYWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVA 491

Query: 484 MGHPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIVLRE 543
             HP V  CAAIGVPDE SGE VKLFVV ++  L+  ELKA+C  N T YK PK I  R 
Sbjct: 492 ASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRT 551

Query: 544 SLPMTPVGKILRRELRDI 561
            LP + VGKILRRELR++
Sbjct: 552 DLPKSNVGKILRRELRNL 569