Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  314 bits (805), Expect = 5e-90
 Identities = 196/570 (34%), Positives = 313/570 (54%), Gaps = 27/570 (4%)

Query: 6   WKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGAFAAW 65
           W   YP G+  +      P +Q +L ++  R+ +  A   +G+ ITY +L A     A  
Sbjct: 16  WTHHYPPGMRWDAELPVKP-VQQMLDEAVARWPEHSAVEFMGQVITYRQLGAAVERAAKG 74

Query: 66  LQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125
           LQ    +KPG  + + LPN   YP+A F  ++AG  VVN +PL   R + H+  DS    
Sbjct: 75  LQD-LGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLAHKIEDSRTDI 133

Query: 126 LVCL--ANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQ 183
           L+ L   N+     +++  +++R ++V  + D      +  + + ++   ++ P     +
Sbjct: 134 LITLDLVNLYPQMARLLDSSRLRKLVVGSLGDYGAAGDK--VQAQLQGAGQIAPVPTDDR 191

Query: 184 AVRFNDALALGKGQPVTEANPQAN---DVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR 240
            +RF D L   K +   + +P  +   ++ VLQYTGGTTG+ KGAMLTH NL +   Q  
Sbjct: 192 HLRFTDLL---KSEGTHQTHPLGDLTEEIVVLQYTGGTTGLPKGAMLTHANLTSASAQYY 248

Query: 241 ALMGSN---LHEGCEILITPLPLYHIYAFTFHCMAMMLIGNH--NVLISNPR-DLPAMVK 294
                +   L EG E  +  LPL+HI+A +    A ML+G      L+ + R D+ A++ 
Sbjct: 249 ESTKGDPPILDEGSERFLVVLPLFHIFALS----AAMLLGVRLGAALVLHTRFDVDAVMN 304

Query: 295 ELGKWKFSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAI 354
           EL   + S F G+ T++ A+ ++   + +D  +LK   SGG  L + V +R+ A+TGC +
Sbjct: 305 ELAASRISVFPGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFALTGCHL 364

Query: 355 CEGYGMTETSPVAAVNPSEA-NQVGTIGIPVPSTLCKVI--DDAGNELP-LGEVGELCVK 410
            EG+GMTETSPV    P+    + G+ G+P+P    K++  DD   ++   GE GELC+K
Sbjct: 365 NEGWGMTETSPVGTFTPARGVRKAGSCGMPLPQVRIKLVSLDDPSKDVTAFGEAGELCIK 424

Query: 411 GPQVMKGYWQREDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNE 470
           GP VMKGYW    ATAE +  +G+ ++GD+A + ADGY  IVDR KDM+L  G+NVYP  
Sbjct: 425 GPNVMKGYWNNPKATAESMTPDGYFRSGDVAKMDADGYFYIVDRTKDMLLCGGYNVYPRV 484

Query: 471 LEDVLAALPGVLQCAAIGVPDEKSGEVIKVFIVVKPGM-TVTKEQVMEHMRANVTGYKVP 529
           LE+ +   P V +   IG+PDE  G+  K F+ +K G   +T + +   ++  +  +++ 
Sbjct: 485 LEEAVYEHPAVAEVCVIGIPDEYRGQSPKAFVKLKEGAGELTLDALKAFLKDRLGKHEMI 544

Query: 530 RHIEFRDSLPTTNVGKILRRELRDEELKKQ 559
             +E R  LP T VGK+ +++L DEE +K+
Sbjct: 545 GALEIRAELPKTAVGKLSKKDLVDEEARKR 574