Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 537 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  274 bits (700), Expect = 7e-78
 Identities = 181/518 (34%), Positives = 274/518 (52%), Gaps = 24/518 (4%)

Query: 47  GKTITYGELYALSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTN 106
           G  +++ EL   S AFAA LQ    +K G+ + + L N  QY VA FG  + G IV  + 
Sbjct: 33  GHAMSWAELDRASDAFAARLQA-LGVKKGEPVVLFLNNCPQYLVAHFGIQKIGAIVCPSG 91

Query: 107 PLYTAREMEHQFNDSGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLIN 166
           PL    E+ +Q ND  A+ +V  A +  +  KV P++ + HV     ADLL     L + 
Sbjct: 92  PLNKEHELAYQVNDLKARVIVAAAPLLPVVRKVQPESALEHVFAVHYADLLSAEPSLDLP 151

Query: 167 SVIKYVKKMVPAYNLPQAVRFNDALALGKGQPVTEANPQA-----NDVAVLQYTGGTTGV 221
           + +        A  +P+     D LA+ K    ++A PQ      +DVA++ YT GTTG+
Sbjct: 152 AELAVEHNA--ARTVPEGCE--DFLAVMK----SDARPQPVAIEMDDVALMTYTSGTTGL 203

Query: 222 AKGAMLTHRNLVANMLQCRALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNV 281
            KGAML++ N    + + RA    N     ++L++  PLYHI          +L G  +V
Sbjct: 204 PKGAMLSYGNA---LFKTRAAADCNGVGPADVLLSIAPLYHIAGMLMGVNVPVLSGATSV 260

Query: 282 LISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRALDFSALKIT--LSGGMALQ 339
           L+    D  A+++ +  +K S +  +  + VA          D S+LK+    S G+   
Sbjct: 261 LLHR-FDPRAVLQAIASFKVSWWYSIAPMNVACMQVPDIAGFDLSSLKMNPVTSFGITFT 319

Query: 340 LSVAERWKA-VTGCAICEG-YGMTETSPVAAVNPSEANQVGTIGIPVPSTLCKVID-DAG 396
             +A++W++    C   E  YG++ET       P  A + GT GI VP    ++ID +  
Sbjct: 320 EPLAQQWRSHAPNCTSFEAAYGLSETHTCDTYTPHHAPRWGTQGIAVPGVTIRIIDTETQ 379

Query: 397 NELPLGEVGELCVKGPQVMKGYWQREDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKK 456
            ++P GEVGE+ +  P   KGYW + +ATA  L + GW+ TGD+  + ADGY+  + R K
Sbjct: 380 ADMPAGEVGEIVLTSPGSFKGYWNKPEATAATLRN-GWVHTGDMGKLDADGYLTFIGRFK 438

Query: 457 DMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVM 516
           +MI VSG++V+P E+E +L   P V Q A I  PD + GEV+K FIV KPG  +  + ++
Sbjct: 439 EMIKVSGYSVFPEEVETILIKHPAVAQAAVIAQPDAEKGEVVKAFIVRKPGAALEADALV 498

Query: 517 EHMRANVTGYKVPRHIEFRDSLPTTNVGKILRRELRDE 554
              R N+  YK PR + F D+LPTT  GK+LRR L+D+
Sbjct: 499 AWARDNMASYKAPRAVSFIDALPTTGAGKVLRRLLKDK 536