Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score =  569 bits (1466), Expect = e-166
 Identities = 295/554 (53%), Positives = 393/554 (70%), Gaps = 9/554 (1%)

Query: 6   WKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGAFAAW 65
           W   YP G+ +EI      ++  +L++SC++FAD+ AFS++GK++TY EL A + A AAW
Sbjct: 18  WLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVAAW 77

Query: 66  LQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125
           LQ    L+ GDR+AV +PN+LQ PVAV+G +RAG++VVN NPLYT RE+EHQ  DSGAKA
Sbjct: 78  LQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGAKA 136

Query: 126 LVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQAV 185
           L  L N AH+A++ VPKT VRHV+V  + DLL  LK  ++N V++ VKK+VPA+ +P ++
Sbjct: 137 LFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLG-LKGHIVNLVVRKVKKLVPAHAIPGSI 195

Query: 186 RFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGS 245
            F   L  G+G  +      A D+A LQYTGGTTGV+KGA+LTH NL+AN  Q    + +
Sbjct: 196 SFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQISLWLDA 255

Query: 246 NLH---EGCEIL--ITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK 300
             +   +  E+L  I  LPLYHI+A T + +  + +G HN+LI+NPRD+P  VKEL  ++
Sbjct: 256 AFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELSHYQ 315

Query: 301 FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM 360
              F GL TLF AL NNE FR LD S+L   L GGMA+Q  VAERW +V GC I EGYG+
Sbjct: 316 PHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEGYGL 375

Query: 361 TETSPVAAVNPSEANQV-GTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYW 419
           +ETSPVA VN  +A +  GTIG+P+ ST   + D+ GN LP GEVGE+C++GPQVM GYW
Sbjct: 376 SETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMAGYW 435

Query: 420 QREDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALP 479
           QR D TA+ + ++G+ ++GD+  +   GY +IVDRKKDMILVSGFNVYPNE+E+V A+ P
Sbjct: 436 QRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAASHP 495

Query: 480 GVLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLP 539
           GVL+CAAIGVPDE SGE +K+F VVK   ++T+ ++      N+T YK P+ IEFR  LP
Sbjct: 496 GVLECAAIGVPDEHSGETVKLF-VVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRTDLP 554

Query: 540 TTNVGKILRRELRD 553
            +NVGKILRRELR+
Sbjct: 555 KSNVGKILRRELRN 568