Pairwise Alignments

Query, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

Subject, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

 Score =  258 bits (658), Expect = 2e-72
 Identities = 177/472 (37%), Positives = 256/472 (54%), Gaps = 30/472 (6%)

Query: 69  NLPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLIAHTQPRRIAA 128
           +LPI A    +++AL     +V+    G+GKTT++P   L     +   I   +PRR+AA
Sbjct: 3   SLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRLAA 62

Query: 129 RSVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHDRFLERYDTII 188
           R+ A R+A ELG  +G  VGY++R + +    T ++++T+GIL    Q D  LE    +I
Sbjct: 63  RAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLI 122

Query: 189 VDEAHERSLNIDFLLGYL---KTLLHRRPDLKLIITSATIDLERFSRHFDGAPIIEVSGR 245
            DE HERSL+ D  L      + LL   P LK+++ SAT++ ER SR  D AP++   GR
Sbjct: 123 FDEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSEGR 182

Query: 246 TFPVDT-WYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDVLIFLPG 304
             PVD  W RP      + G  IE  + VD  + A  D+            G VL+FLPG
Sbjct: 183 MHPVDIRWGRPF-----QPGEFIEPRV-VDCVLHALADQA-----------GSVLVFLPG 225

Query: 305 EREIRDAAEILRKAQLRHTEIL--PLYARLS-PAEQQRIFQPHTG-RRVVLATNVAETSL 360
           + EIR   + L++      EIL  PL+  L   A++  I  P  G R+VVLATN+AETSL
Sbjct: 226 QAEIRRVHQSLQEVLGARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSL 285

Query: 361 TVPGIRYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSEE 420
           T+ G+R VID G AR+ R+   + + RL  + +S+ASA QR GR GR+EPG+C RL+SE 
Sbjct: 286 TIDGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEA 345

Query: 421 DFNSRPAFTDPEILRTNLAAVILQMLHLRLGAI-DAFPFIEPPDGKAISDGFNLLQELSA 479
             +   A    EIL+ +LA + LQ+   R G   +   +++ P   A +   +LL  LSA
Sbjct: 346 QHDQLAAHGSAEILQADLAGLALQL--ARWGVTPEQLRWLDQPPAAAYAQAQDLLARLSA 403

Query: 480 V--NRENQLTPIGRQLARLPIDPRLGRMLLEGARLGSLQEVLIVTSALSVQD 529
                 + L+  G+ +A LP  PR+  +LL G  LG  Q    V + L  +D
Sbjct: 404 FRPGSRDTLSEHGQAMAELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERD 455