Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

 Score =  234 bits (597), Expect = 8e-66
 Identities = 123/253 (48%), Positives = 162/253 (64%), Gaps = 5/253 (1%)

Query: 343 PVTVTDPPNAPALKVSRGAVRFVDVDFHYGKATNVIEGLNLDIRPGEKIGLIGPSGAGKS 402
           P    D     AL   RG V F DV F Y    NV+  L+L   PG    L+G SG GK+
Sbjct: 335 PAPDADSSGVGALPRPRGRVEFKDVVFAYRPGENVLRSLDLVAEPGRTTALVGQSGGGKT 394

Query: 403 TLVNLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPG 462
           T++NL+ R YD Q G +LID  D   VS+ S+RA + +++QD  L   +IREN+ +GRPG
Sbjct: 395 TIINLIERFYDPQSGAVLIDDVDTRSVSRTSVRASVALVSQDVYLFSGTIRENIGFGRPG 454

Query: 463 ASDAELHEAVRRARADEFIPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNA 522
           AS+ E+  A + A A  FI    +     G+D  VGE G +LSGGQRQRIAIAR  LKNA
Sbjct: 455 ASEEEIVAAAKAAHAHPFIMSFEN-----GYDTAVGEHGAQLSGGQRQRIAIARAFLKNA 509

Query: 523 PILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVES 582
           PIL++DEAT+ALDSE EA +Q++L  L   +T I IAHRL T+ R DR+ V++ GR+VES
Sbjct: 510 PILLLDEATAALDSESEAEVQKALAELAHERTTIVIAHRLQTVVRADRICVIEGGRVVES 569

Query: 583 GSHSELLEQQGLY 595
           G+H EL+ ++G Y
Sbjct: 570 GTHDELIARRGRY 582