Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

 Score =  590 bits (1520), Expect = e-173
 Identities = 304/608 (50%), Positives = 412/608 (67%), Gaps = 2/608 (0%)

Query: 2   LYRRFERLIDIFREAPSEAPPSTVWPFYLYYLRQVWPSFVALLVVGLVASLIEVAMFSYL 61
           L+R FE+L+  +  A    PP   + F       V     A+ V+  V S+ E A+F+ L
Sbjct: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60

Query: 62  SRIIDLAQGTPNANFFSEHSGELIWMLVVILLLRPLFFGLHDLLVHQTINPGMTSLIRWQ 121
            RI+D   G   +  + +    L+W L   L++      L  ++ HQT+   +   +RW 
Sbjct: 61  GRIVDWLGGQVPSRLWEDRGTTLMW-LAAFLVISIGVVALQTIVKHQTLAVNLPMRLRWN 119

Query: 122 NHTYVLKQSLNFFQSDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAITSLVLFAEA 181
            H  +L QS+ F+Q +FAGRI  ++MQT  ++R++     D L  + +Y  T ++L    
Sbjct: 120 FHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVL 179

Query: 182 DWRLMLPLLAWIVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVDGYTNIATLKLFAHT 241
           D +L+ P L W+V Y+ +L YFVPR+ +     +DAR+ + GR+ D YTNIAT+KLF+HT
Sbjct: 180 DAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHT 239

Query: 242 DYEQQYAREAIREQTEKTQLASRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVGA 301
             E  +AR+A+RE         R++++ ++V  TL+  L     G+ALWLWS   + VGA
Sbjct: 240 QREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGA 299

Query: 302 IALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDPPNAPALKVSRGA 361
           +A AT + +R+  MS WIMW +  +FENIG VQDG++T+++P TV D  +A  L+V +G 
Sbjct: 300 VAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGE 359

Query: 362 VRFVDVDFHYGKA-TNVIEGLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRIL 420
           VRF    F YG     VI+ LNL ++PGEKIGL+G SGAGKSTLVNLLLR +D++ GRIL
Sbjct: 360 VRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRIL 419

Query: 421 IDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEF 480
           IDGQDIA V+Q SLR+ IGM+TQDTSL+HRS+ +N+ YGRP A+  ++  A RRA A +F
Sbjct: 420 IDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDF 479

Query: 481 IPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEA 540
           I  L DA GR G++AHVGERGVKLSGGQRQR+AIARV+LK+APIL++DEATSALDSEVEA
Sbjct: 480 IQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEA 539

Query: 541 AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWH 600
           AIQ+SL TLM+GKTVIAIAHRLSTIA MDRL+VLD+GR+VE G H  L+ Q GLYARLW 
Sbjct: 540 AIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWA 599

Query: 601 HQTGGFVG 608
           HQ+GGF+G
Sbjct: 600 HQSGGFLG 607