Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 1191 a.a., Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 / Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 2e-63
 Identities = 160/461 (34%), Positives = 248/461 (53%), Gaps = 48/461 (10%)

Query: 157 AVQAVDALWHVLIYAITSLVLFAEADWRLMLPLLAWIVSYIAALFYFVPRVKERSVVSSD 216
           A+ AV A W V     T+LV  A A + L  P+   ++   A+L       + RS+    
Sbjct: 131 AIFAVIAFWDVP----TALVFLAAALFALFGPMAVHMLDRRASL------ARTRSL---- 176

Query: 217 ARSKLMGRIVDGYTNIATLKLFAHTDYEQQYAREAIREQTEKTQLASRVITSMDVVITTL 276
             ++     +D    + TLK +     + +   E +  +  K   ++  + S+ ++   +
Sbjct: 177 --NEFGEEFLDAVQGLPTLKSYG----QGKAWGERLAARARKLSDSTFWVLSVSLLTRGI 230

Query: 277 NGLLVVATTGLALWLWSQSLITVGAIALATGLV----IRIVNMSGWIMWV----VNGIFE 328
           + L V     LAL        TVGA  +A G +    + IV M+G  ++     +  +  
Sbjct: 231 SDLGVALGAALAL--------TVGAWRVAAGDMSVEALLIVLMAGTEIFRPLRDLRSVLH 282

Query: 329 NIGMVQDGLQTIAQPVTVTDPPNAPALKVSRGA-------VRFVDVDFHYGKATNVIEGL 381
              + Q    +I   +       AP  +V  GA       + F  V F Y       +GL
Sbjct: 283 RGMLGQSAAASIHALMDAWPLTAAPDAQVVAGAPTRLEPTIEFDGVSFSYSPQRPAHQGL 342

Query: 382 NLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIGMI 441
           +L I  GE++G++GPSGAGKST+V LLLR    Q G I + G D+ ++   +L + + ++
Sbjct: 343 SLRIAAGERVGIVGPSGAGKSTIVRLLLRECVPQAGTIRVGGLDVNRLDTQTLLSHMALV 402

Query: 442 TQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEFIPQLSDAQGRTGFDAHVGERG 501
           +QD +L H +I +NL  GRP A+  ++  A R A  D+FI  L       G+   +GERG
Sbjct: 403 SQDITLFHGTIDDNLRLGRPDATHEQVRAAARAANIDDFIMALPQ-----GYATAIGERG 457

Query: 502 VKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHR 561
           ++LSGGQRQR+AIAR LL++APILI+DEA S++D+E EA IQ++L+ LM G+T + +AHR
Sbjct: 458 LQLSGGQRQRVAIARALLRDAPILILDEALSSVDTENEALIQQALDRLMAGRTTLILAHR 517

Query: 562 LSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWHHQ 602
           L+++   DR +VLD+GR+VE G H+EL+ QQGLY RL H Q
Sbjct: 518 LASVIGADRCLVLDQGRVVEQGPHAELMRQQGLYHRLMHEQ 558



 Score =  206 bits (524), Expect = 5e-57
 Identities = 143/448 (31%), Positives = 232/448 (51%), Gaps = 18/448 (4%)

Query: 168  LIYAITSLVLFAEADWRLMLPLLAWIVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVD 227
            ++  +T L   A   W + L LL ++   + +      ++      +  A  ++     D
Sbjct: 743  VLVPLTVLCFLAVYSWPVALALLPFLAYALVSPINGRRKIDALGDRARHALGEMSAHTAD 802

Query: 228  GYTNIATLKLFAHTDYEQ-QYAREAIREQTEKTQLASRVI--TSMDVVITTLNGLLVVAT 284
                +A L  F  T   + Q+   A + +  +  + + +   T+   V   L GL V A 
Sbjct: 803  TIQGLADLTAFQATGRRRVQFLEIADQCRARRLDMLADLSRQTAWFEVAMGLGGLAVAAV 862

Query: 285  TGLALWLWSQS---LITVGAIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIA 341
              L +   + S   L  +  IALAT L +  ++       V   + + I   +       
Sbjct: 863  GALQVAAGALSAGMLPLLVLIALATFLPVSEISQ------VSRQLADTIAATRRLHVVNN 916

Query: 342  QPVTVTDPPNAPALKVSRGAVRFVDVDFHY-GKATNVIEGLNLDIRPGEKIGLIGPSGAG 400
            +P  V D P  P       ++ F  V F Y GK  + +  L+  +  G  + ++G SGAG
Sbjct: 917  EPEPVADGPLPPPEASHGLSLAFERVSFAYPGKPQDTLRDLSFVVPAGATVAVVGASGAG 976

Query: 401  KSTLVNLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGR 460
            KST+ +L+LR +D + G + +DG D+ ++    LR ++ ++TQDT L + ++  N+   R
Sbjct: 977  KSTVASLMLRFWDPRQGTVKLDGVDVRQLRLDGLRERVALVTQDTYLFNDTLEGNIRLAR 1036

Query: 461  PGASDAELHEAVRRARADEFIPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLK 520
            P AS  EL  A+++A    F+  L +     G    VGERG++LSGGQRQRI+IAR  LK
Sbjct: 1037 PDASREELALALQQAALSAFVQTLPE-----GLATRVGERGMQLSGGQRQRISIARAFLK 1091

Query: 521  NAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIV 580
            NAP+LI+DEATS LD+  EA ++ +L+ LM+ +T + +AHRLSTI   D ++VL+ G + 
Sbjct: 1092 NAPVLILDEATSHLDTLSEAQVRGALDVLMRHRTTLVVAHRLSTIRDADLILVLENGALA 1151

Query: 581  ESGSHSELLEQQGLYARLWHHQTGGFVG 608
            E+G+H +LL +QG+YA+L  HQ   F G
Sbjct: 1152 EAGTHEQLLRRQGVYAKLASHQGASFGG 1179