Pairwise Alignments

Query, 308 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 78/282 (27%), Positives = 121/282 (42%), Gaps = 20/282 (7%)

Query: 16  MLGLCLIWGCQQVLIKTAAVDIAPVMQAALRNGIAAV-LVGLMLCWRGGWEQVGSTWRAG 74
           +LGL  IWG   + ++  A +I  V  A  R  IAA  L+ ++   R  W+  G  +R  
Sbjct: 9   LLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDFQGK-FRTV 67

Query: 75  LVAGGL-FGVEFLFIAEGLKLTSAAHMSVFLYTAPVFTAL--GLHFRLPSERLRLLQWLG 131
           L+ G +  G+     +   +   A + ++F  T P+   L  GL F   SERL   +  G
Sbjct: 68  LLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFF---SERLTPSKIAG 124

Query: 132 ILLAFGGIA-MAFAGGSSFEHMDGRTLLGDAFGVIAGLAWGATTVVVRCSRLSEAPATLT 190
           + L   G+  +  AG  +F   D   L G    ++A   +G    + R  R  +    L 
Sbjct: 125 VCLGLFGVGVLTRAGPVAF---DLELLTGALACLLATTCYGFAGFLAR--RWLDQRGGLD 179

Query: 191 LFYQLAVGFAGLLLIALLSGQIGAVSLTPLAMG------SVLFQGIVVSFISYLTWFWLL 244
                     G  L  L      A+S  P + G      S+L  G+V +  +Y+ +F LL
Sbjct: 180 SRLSALGSMLGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLL 239

Query: 245 RKYLASNLAVFSFITPLFGVTFGVLLLDEPLSANFVVGALMV 286
                      +F+ P FGV +G LLL EPLS   V G +++
Sbjct: 240 TSIGPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVYGGVLI 281



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 165 IAGLA--WGATTVVVRCSRLSEAPATLTLFYQLAVGFAGLLLIALLSGQIGAVSLTPLA- 221
           + GLA  WGA+ + +R     E     T F+++++  AGLL+I  +      VS      
Sbjct: 9   LLGLAAIWGASFLFMRIIA-PEIGTVPTAFFRVSIAAAGLLVILAMM----RVSWDFQGK 63

Query: 222 MGSVLFQGIVVSFISYLTWFWLLRKYLASNLAVFSFITPLFGVTFGVLLLDEPLSANFVV 281
             +VL  G++ S I    +    +   A   A+F+  TPL GV  G L   E L+ + + 
Sbjct: 64  FRTVLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIA 123

Query: 282 GALMVLLGV-ILVSAEP 297
           G  + L GV +L  A P
Sbjct: 124 GVCLGLFGVGVLTRAGP 140