Pairwise Alignments

Query, 308 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 297 a.a., putative inner membrane transporter YedA from Pseudomonas sp. RS175

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 21/289 (7%)

Query: 19  LCLIWGCQQVLIKTAAVDIAPVMQAALRNGIAAVLVGLMLCWRGGWEQVGSTWRAGLVAG 78
           L +IWG   ++I+       P++ A +R  +A  ++   L WRG      + W+AG + G
Sbjct: 18  LYVIWGSTYLVIRIGVEHWPPLLLAGIRFVLAGSMMYGFLRWRGAPAPTWAQWKAGAIIG 77

Query: 79  GL---FGVEFLFIAEGLKLTSAAHMSVFLYTAPVFTALGLHFRLPSERLRLLQWLGILLA 135
            L   FG   + +AE   + S    ++ + T P+FT L  +F     R   L+W GI+L 
Sbjct: 78  VLLLSFGNGAVSVAEHTGVASGV-AALAVATVPLFTLLCGYFW--GARNTRLEWAGIVLG 134

Query: 136 FGGIAMAFAGGSSFEHMDGRTLLGDAFGVIAGLAWGATTVVVRCSRLSEAPATLTLFYQL 195
             GIAM   G +      G TLL     V A  +W   +V+ +   L      +    ++
Sbjct: 135 LIGIAMLNLGSNLQSSPLGATLL-----VFAAASWAFGSVLSK--HLPLPAGAMASAVEM 187

Query: 196 AVGFAGLLLIALLSGQIGAVSLTPL----AMGSVLFQGIVVSFISYLTWFWLLRKYLASN 251
            VG   LL+ ++ SG+     + PL    A+  +   G +++F +Y+   +LL+    + 
Sbjct: 188 LVGGVVLLIGSVASGE-HLDRMPPLEGWFALAYLTCFGSIIAFNAYM---YLLKHVRPAA 243

Query: 252 LAVFSFITPLFGVTFGVLLLDEPLSANFVVGALMVLLGVILVSAEPWVK 300
              ++++ P   V  G++   E +     V  L+++  V+L+    W K
Sbjct: 244 ATSYAYVNPAVAVLLGIVFAGESIGIEETVAMLVIISAVVLIGLPQWRK 292