Pairwise Alignments

Query, 459 a.a., putative Sodium-solute symporter from Pseudomonas putida KT2440

Subject, 547 a.a., transporter for D-glucose/D-galactose/D-xylose/methyl-beta-D-galactopyranoside (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 118/520 (22%), Positives = 216/520 (41%), Gaps = 79/520 (15%)

Query: 3   LDIIVVMIYTAGMLGLGWYGMRRAKTH----EDYLVAGRNLGPVLYMGTMATTVLGGAST 58
           LD++V + Y   ++ +G    R  K H    +DY +A + L       ++  + +     
Sbjct: 6   LDLVVFVAYCLLIITMGIVVSREKKGHVKDSKDYFLASKALPWWAVGASLIASNISAEQF 65

Query: 59  VGTVRLGYVHG--ISGF-WLCAALGLGIIAINLFLAKPLLRLRIFTVTQVLEQRYNPTAR 115
           +G    G+  G  IS + W+ AA    ++ + +F     L+  I+T+ Q L +RY+   R
Sbjct: 66  IGMSGSGFALGLAISTYEWMAAAT---LLVVAIFFLPIYLKEGIYTMPQFLNRRYDGRVR 122

Query: 116 QASAVIMLAYALMIGVTSTLAM-ATVLQVLLDLPFWASLMLGGGVVVLYSTIGGMWSLTL 174
              A+  L   + + +TS L + A  L+ ++ +P    ++      ++YS  GG+ ++  
Sbjct: 123 TVMAIFWLLIYVFVNLTSVLYLGALSLETIMGVPLTYGIIGLALFAMVYSIYGGLKAVAW 182

Query: 175 TDIVQFVIKTV-GLMFILLPVCLYKAGG-WD--TLVAKLPAASFQLTTIGWDTII----- 225
           TD+VQ V     GL    L + L   G  W+   ++ K   + F +     + +I     
Sbjct: 183 TDVVQVVFLVAGGLATTYLALSLVGDGDVWEGIGILRKAAPSHFSMIIEKGEMMIPDGSG 242

Query: 226 ----TYFLIYFFGILIG-------------QDIWQRVFTARDEKVCQRAGTAAGVYCVLY 268
                Y  +    +LIG             Q I QR   A+     Q     AG   +L 
Sbjct: 243 GSRDAYLDLPGLSVLIGGMWIVNLNYWGCNQYITQRALAAKSLGEAQTGMVFAGFLKLLM 302

Query: 269 GLACAAIGMAAHVL----------------MPDLANPNNAFAEMIKTTLPDGIRGLLMAA 312
            L     G+AA+V+                +  LA  + A+  ++   LP G++GL  AA
Sbjct: 303 PLIVVIPGIAAYVIVQKGADASFIESMTDPVTGLAKSDRAYPTLLH-LLPPGLKGLAFAA 361

Query: 313 ALAAMMSTASAGLLAASTTVTEDLLPK-----LRGGKQSSLGTSRLFTLLTGLVVLGIAL 367
             AA++S+ ++   + ST  T D+  +     +  GKQ ++G       +T +V   IA 
Sbjct: 362 LTAAIVSSLASMANSTSTIFTIDIYKEFFNKNVSEGKQVTIGR------ITAVVAFIIAA 415

Query: 368 MVNDVINALTLAYNLL--VGGMLIPLIGAI-----FWKRATTAGAIASMSLGFATALLFM 420
           +V   +  L  A+  +    G + P + AI     FWK+ T+  A+ +  L    +  F 
Sbjct: 416 IVAPQLRQLDQAFQYIQEYTGFVSPGVFAIFIFGFFWKKTTSNAALTAAVLTIPLSAAFK 475

Query: 421 -------FLDGLEANTPIYYSLAVGLVSFVGVSLVSRKSV 453
                  F+D +     +   L + +  + G    S+K++
Sbjct: 476 VITPNLPFIDRMGVVFLVLSVLIIAISLYEGKGKDSKKAI 515