Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  187 bits (474), Expect = 3e-52
 Identities = 107/287 (37%), Positives = 161/287 (56%), Gaps = 3/287 (1%)

Query: 7   DLKLLRIFISVVRHQGFANAQRELNLSTSAISTYMSQLEGALGIVLCHRGRGGFSLTSKG 66
           D++LLRIF SVV   GF+ A+  L +  SAIS  MS LE  LG+ LC RGR GFSLT +G
Sbjct: 16  DIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLRLCQRGRAGFSLTEEG 75

Query: 67  ELFHQETLRLLAELDGFEQYAAALKGELRGTLNLGVIDSTVGDRALPLAEAIGAYSQEHP 126
              +Q  L+LL+ L+ F      L   LRG L +G+ D+ V    + +  A+    +  P
Sbjct: 76  REVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPHMRITHALAQLKERGP 135

Query: 127 AVHLHLSVSSPYELQLGVQDNRLDLAIGAFSSRMSGLLYQPLYREQHWLYCSSRHPLY-- 184
            V + + + +P E++ GV D RL + +   +S +SGL YQPLY E+  LYC+  HPL+  
Sbjct: 136 DVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSERSLLYCAVGHPLFYV 195

Query: 185 AERRIPEQVVTQQRMVGRGYWSQAEL-ARHGFKHSAATVESMEAQLILILSGAYIGYLPE 243
            ++++ +Q +  Q  +   +   AE+ A +   +  A+    E    LIL+G YIGYLP+
Sbjct: 196 DDKQLDDQRLDSQDAIAPTFRLPAEIQAHYQALNCTASASDREGMAFLILTGRYIGYLPD 255

Query: 244 HYAQAWVDKGDLRVLSPSTFGYQAPFSLIIRRGRSREPLIQTFRDLL 290
           HYA  WV +G LR L   T  Y    + + R+GR    ++++F + L
Sbjct: 256 HYANLWVQQGRLRALKAGTRFYDLSLASVTRKGRRPHLVLESFLESL 302