Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  204 bits (520), Expect = 7e-57
 Identities = 116/282 (41%), Positives = 170/282 (60%)

Query: 238 RLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTH 297
           +LQ  +T++V +   V   +  ++D++    Q + +Q  E DQ ATA+ +M AT Q V  
Sbjct: 429 KLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVAR 488

Query: 298 NVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVDV 357
           N    A AAS ADQ A QG  +   +   +G++++ +      V  LA+ +++I +++  
Sbjct: 489 NATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTA 548

Query: 358 ITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRAG 417
           I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAQ+T+ +TEEI  +I  L+ G
Sbjct: 549 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQG 608

Query: 418 AERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHVAEDI 477
               V      +  + +SV        AL  I  AVS I  M+ Q+A+A+E+QS VAEDI
Sbjct: 609 TRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDI 668

Query: 478 NQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERF 519
           N+ ++ I Q+ ++ AG A + +  S DL ++AE    L  +F
Sbjct: 669 NRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQF 710



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 33/187 (17%), Positives = 71/187 (37%)

Query: 331 SDAVNDIGQAVNALAEQTQSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVA 390
           SD  +++G   N        +  ++  + S  ++ +  + + A  A R  +      V  
Sbjct: 410 SDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEI 469

Query: 391 DEVRSLAQRTRASTEEIHHIIASLRAGAERAVSTASRGEQISRDSVHSVEAVQAALSGIA 450
           D+V +      A+ +++          A  A   AS+G +I RD+  S+ A+   +    
Sbjct: 470 DQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAV 529

Query: 451 VAVSRITGMSQQMATASEQQSHVAEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAE 510
             V  +   S+ +         +AE  N   +  A    ++  Q R  A ++ ++  +A+
Sbjct: 530 SVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQ 589

Query: 511 YLHSLAE 517
                 E
Sbjct: 590 KTQKATE 596