Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 534 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  295 bits (756), Expect = 2e-84
 Identities = 203/556 (36%), Positives = 286/556 (51%), Gaps = 81/556 (14%)

Query: 1   MRMNLPVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPD 60
           MR+NLPVT  E   P D  L+S TDL  RITY N AFV  SG+  DEL+G+ HN+VRHPD
Sbjct: 1   MRVNLPVTGIEYELPRDAALVSRTDLKGRITYVNPAFVEASGYAVDELMGKAHNIVRHPD 60

Query: 61  MPPAVFGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120
           +PP  F  +W+T+ QG PW GI+KNR  NGD+YWV A VT I   GR+ GY SVRS P R
Sbjct: 61  VPPEAFADLWQTLGQGLPWTGIIKNRRSNGDFYWVLANVTPIRRDGRVQGYMSVRSRPDR 120

Query: 121 EQIRRAEALYARLRDG-------------------------RSPV--------PWAARLG 147
             +  A+ALY RLR+G                         R PV          AA L 
Sbjct: 121 ADVAEADALYRRLREGGAKGVTLQQGQVVQRGWMNPLAQLRRIPVRQRVFGATTAAALLT 180

Query: 148 HGLG-HGWPLIGAGLLSAAGYLWLPPYAALAVLMASLLLAWYWVEHRQNQAIRRTLAEHP 206
            GLG  GW   G  + SA  + WLP   ALA       LAW  +     + + R L E  
Sbjct: 181 LGLGIAGWMEAGRLVASAGVHSWLP--GALAAGGVGFALAWLGLGQFLGRTVFRPLDE-- 236

Query: 207 KAFTSPLVALTYSDNPGLKGQLDLAIISEEARLQTALTRL--------VDAGVGVKSRAA 258
                  + +  +   G   + ++    E   L  AL ++         D G  V    +
Sbjct: 237 ------ALHVARAIAGGDLAKFEIRRGDEITGLLRALNQMSANLFAIVADVGTNVAGVMS 290

Query: 259 QSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQSTAHAASDADQLAQQGSE 318
            SS ++     +     S T+Q A+++ Q AA+++++T  V+  A  A  A+QLA   SE
Sbjct: 291 ASSQIASGNQDL----SSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASE 346

Query: 319 LALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVDVITSIAEQTNLLALNAAIEAAR 378
           +A+K     GS+   V D   ++NA    ++ I  ++ VI  IA QTN+LALNAA+EAAR
Sbjct: 347 VAVKG----GSVVSQVVDTMGSINA---SSRKIVDIIGVIDGIAFQTNILALNAAVEAAR 399

Query: 379 AGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRAGAERAVSTASRGEQISRDSVHS 438
           AGEQG+GFAVVA EVRSLAQR+ A+ +EI  +I                G+ + +    S
Sbjct: 400 AGEQGKGFAVVASEVRSLAQRSAAAAKEIKTLI----------------GDSVEKVEAGS 443

Query: 439 VEAVQA--ALSGIAVAVSRITGMSQQMATASEQQSHVAEDINQQIVRIAQLCDQSAGQAR 496
            +  +A   +  I  +V R+T +  ++ TAS++Q+   E INQ I ++ Q+  Q+A    
Sbjct: 444 KQVAEAGRTMEEIVGSVRRVTDIMGEITTASQEQTSGIEQINQAIAQMDQVTQQNAALVE 503

Query: 497 QGAEISQDLERMAEYL 512
           + +  +Q L+  A+ L
Sbjct: 504 EASATAQSLQEQADGL 519