Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  223 bits (567), Expect = 2e-62
 Identities = 137/347 (39%), Positives = 204/347 (58%), Gaps = 3/347 (0%)

Query: 175 ALAVLMASLLLAWYWVEHRQNQAIRRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLAIIS 234
           AL  ++   L AW  +  +  Q +R+TLA   +     L  +         GQL  ++  
Sbjct: 302 ALLAMVVGALAAWL-ITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQTSMRE 360

Query: 235 EEARLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQM-LDRQRSETDQSATAIAQMAATIQ 293
               L+  +   +D GVG  S+AA     S    ++ +++QR ETDQ ATA+ QM+AT+Q
Sbjct: 361 MTLSLRDLIGG-IDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQ 419

Query: 294 QVTHNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGS 353
           +V  N +  + AA++ADQ AQ G ++  +++  +  ++  ++    A+  LA ++Q IGS
Sbjct: 420 EVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGS 479

Query: 354 VVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIAS 413
           ++DVI S++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT  +TEEI  +I S
Sbjct: 480 ILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDS 539

Query: 414 LRAGAERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHV 473
           L  G +         + ++  SV        ALS I   VS I GM+QQ+ATASE+QS V
Sbjct: 540 LHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVV 599

Query: 474 AEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERFN 520
           AE IN+ ++ +  + DQ++  + Q A  S +LE++ + L  +  RF+
Sbjct: 600 AEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFS 646



 Score = 42.4 bits (98), Expect = 5e-08
 Identities = 51/266 (19%), Positives = 106/266 (39%), Gaps = 23/266 (8%)

Query: 260 SSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQSTAHAASDADQLAQQGSEL 319
           S DL   + +  DR+        T++A +A  +  +   + +         Q  +Q   +
Sbjct: 276 SLDLGKRKVEQRDREALAARSLLTSVALLAMVVGALAAWLITL-----QITQPLRQTLAV 330

Query: 320 ALKSLKDMGSMSDAV---NDIGQAVNALAEQTQS----IGSVVDVITSIAEQTNLLALNA 372
           A +  K   S  D V   +++GQ   ++ E T S    IG +   +  +++    LA ++
Sbjct: 331 AARIAKGDLSQVDTVQRRDEMGQLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASS 390

Query: 373 AIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRAGAERAVSTASRGEQIS 432
                R  +Q        D+V +   +  A+ +E+          A  A   A  G+Q+ 
Sbjct: 391 EDTKLRINQQREE----TDQVATAMNQMSATVQEVAQNAEQASLAATNADQQAQVGDQVV 446

Query: 433 RDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHVAEDINQQIVRIAQLCDQSA 492
            +++  +E +   +     A+  + G SQ++ +  +    V+E  N        L   +A
Sbjct: 447 SEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVIKSVSEQTN-------LLALNAA 499

Query: 493 GQARQGAEISQDLERMAEYLHSLAER 518
            +A +  E  +    +A+ +  LA+R
Sbjct: 500 IEAARAGEAGRGFAVVADEVRGLAQR 525