Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 605 a.a., ATP-dependent DNA helicase RecQ from Xanthobacter sp. DMC5

 Score =  673 bits (1737), Expect = 0.0
 Identities = 336/592 (56%), Positives = 431/592 (72%), Gaps = 2/592 (0%)

Query: 8   VLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLI 67
           VL+ +FGY++FRGRQ  I+E V  GGDALVLMPTGGGKSLC+QVP L+RPG  +VVSPLI
Sbjct: 13  VLRHVFGYEAFRGRQREIVEHVVAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLI 72

Query: 68  ALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFL 127
           ALM DQV  L +LGV AA LNS+L   + R++   L  G++ +LY+APERL+    L+ L
Sbjct: 73  ALMHDQVQALRQLGVKAAMLNSSLAPGEGRQVERALAMGDLDLLYVAPERLLTDGFLNLL 132

Query: 128 RDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEIVQR 187
               ISLFAIDEAHCVSQWGHDFRPEY QL  L E +P VPR+ALTATAD  TR EIV+R
Sbjct: 133 DGARISLFAIDEAHCVSQWGHDFRPEYRQLTILHERYPGVPRMALTATADGPTRREIVER 192

Query: 188 LHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETAAF 247
           L+L+  + FLSSFDRPNI YRI PK  PR QL AFL    G AGI+YC+SR KV+ TA  
Sbjct: 193 LNLEEGQVFLSSFDRPNIRYRIAPKANPRVQLKAFLDAHDGEAGIIYCMSRAKVEATAEM 252

Query: 248 LCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPK 307
           L ++G  ALPYHAGL A+TRA +Q RFL EEG++MVATIAFGMGIDKP+VRFV HLDLPK
Sbjct: 253 LSTEGRTALPYHAGLDADTRARHQDRFLKEEGVVMVATIAFGMGIDKPDVRFVVHLDLPK 312

Query: 308 SLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDAMLAL 367
           S+EAYYQETGRAGRDGLPS+  + YG++D+  L Q +  S+  E  KR+E+ KLDA+L L
Sbjct: 313 SIEAYYQETGRAGRDGLPSETLLLYGVEDVAKLIQFVDGSDAPEARKRVERSKLDALLGL 372

Query: 368 CEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRYGVGH 427
            E   CRRQ LL YF+E L QPCG+CD C++  +T+D TE A++ LS V+RTG+R+G GH
Sbjct: 373 AETASCRRQVLLKYFEEDLPQPCGNCDTCLNPPRTFDGTEAAQKLLSCVYRTGERFGAGH 432

Query: 428 LVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYGGLRL 487
           ++DVL G   +KV  FGH+KLS FG+G   +  EWR++ RQLVA G + +D+EG+G L L
Sbjct: 433 VIDVLRGDANDKVTKFGHDKLSTFGIGGNFSRDEWRAVVRQLVAMGYLWVDVEGHGSLGL 492

Query: 488 SDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALRTLRRKLA 547
           ++ CRP+LRGE  ++L+ + +P+    T    G  P++ L    +  L++ L+ LR +LA
Sbjct: 493 TEKCRPVLRGEERVELKAEARPRAARVTGGGRG--PSAALADPADEALFQKLKKLRLELA 550

Query: 548 EEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVL 599
               VPPYVIF D+TL+ +   +P S+  +  +SG+G  KL RYGQ FL+V+
Sbjct: 551 RAQGVPPYVIFHDTTLMAIAELKPTSMKALGMISGIGEAKLMRYGQQFLQVI 602