Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 35/351 (9%)

Query: 14  GYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT------VVVSP-- 65
           GY      QA  I  +  G D +    TG GK+  F +P + R   +      +++ P  
Sbjct: 24  GYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDRVDSSSKQPQALILCPTR 83

Query: 66  -LIALMDDQVATLDEL--GVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPR 122
            L   ++ ++  L +   G+ + A+      ++Q      L+RG V+++   P R++   
Sbjct: 84  ELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRT---LKRG-VQIVVGTPGRVMDHM 139

Query: 123 MLDFLRDLDISLFAIDEAHCVSQWGHDFRPEY-LQLGQLAE------LFPHVPRIALTAT 175
               L+   +    +DEA  +   G  FR +    L Q+ E          + +  +  T
Sbjct: 140 NRGTLKLDTVKTIVLDEADEMLDMG--FREDIETVLSQMPEDRQTIFFSATMAKPIMDLT 197

Query: 176 ADMRTREEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYC 235
              +T  EIV+   +Q  E  + +  +  ++Y + P     + +   +   + N G+V+C
Sbjct: 198 RKYQTNPEIVK---IQRKELTVENISQ--VYYEVKPP-LKMELITRLINIHQFNLGVVFC 251

Query: 236 LSRKKVDETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKP 295
            +++  DE    L ++G  A   H  L+   R    ++F      ++VAT     GID  
Sbjct: 252 NTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATDVAARGIDVD 311

Query: 296 NVRFVAHLDLPKSLEAYYQ---ETGRAGRDGLPSDAWMAYGLQDMVMLKQM 343
           NV  V + DLP   E Y      TGRAGR G+        G +D+  LK +
Sbjct: 312 NVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAIS--FITGRKDIFRLKDL 360