Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  516 bits (1328), Expect = e-150
 Identities = 299/724 (41%), Positives = 434/724 (59%), Gaps = 38/724 (5%)

Query: 6   QRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSP 65
           + VLK+ +GYDSFRG+Q AII+ +    D +VLMPTGGGKS+C+Q+P ++  GLT+V+SP
Sbjct: 5   KEVLKNFYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVISP 64

Query: 66  LIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPR--M 123
           LIALM DQV  L+ +G+ AA LNS+ +A +QR ++  +R G++K+LY+APERL      +
Sbjct: 65  LIALMKDQVDALNGMGIPAAYLNSSQSASEQRFVSEEIRSGKLKLLYVAPERLFGGAFPL 124

Query: 124 LDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREE 183
            + L+   +SL AIDEAHCVSQWGHDFRP+YL +G+L +  P VP +ALTATAD +TR +
Sbjct: 125 TETLKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFVALTATADKQTRAD 184

Query: 184 IVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDE 243
           I  +L L+  + F+SSFDRPNI YRIVPK    ++L+ FL   + N+GI+YCLSRK V++
Sbjct: 185 IADKLGLRKPKWFISSFDRPNITYRIVPKRNSFEKLLDFLEYHQKNSGIIYCLSRKNVED 244

Query: 244 TAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHL 303
            A  L + G  ALPYHAGL  +TRA++Q +F+ ++  IMVATIAFGMGIDK NVRFV H+
Sbjct: 245 MAGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGMGIDKSNVRFVVHM 304

Query: 304 DLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDA 363
           ++P+++E YYQETGRAGRDGLPSDA + Y   D++ L++M+   +  + +  +   KL+ 
Sbjct: 305 NMPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTPDNPD-YSEVMLAKLEK 363

Query: 364 MLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRY 423
           M   C+   CRR+ LL YFDE  ++ CG+CD C+      D T PA+  LS + R  + Y
Sbjct: 364 MKQFCQSNTCRRRYLLGYFDEEEQKDCGNCDRCLSKDNKQDMTVPAQMLLSTIVRLKENY 423

Query: 424 GVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYG 483
           G+G+ V VL G  + KV+   H+ L+V+G+GK  +E  W+ L + L   G +      + 
Sbjct: 424 GLGYCVLVLRGSKSAKVQE-EHKALTVYGIGKEKSEDFWKKLGQHLQQEGYLAEAGTQFP 482

Query: 484 GLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALRTLR 543
            L+L+      L+G+    L+               GG        A E  L+E L+ +R
Sbjct: 483 TLKLTTIAWEKLKGKKKFLLQ------------MGEGGFDHQPTTVAYEEGLFEELKRIR 530

Query: 544 RKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLNNSG 603
             LA++ +VPPYVIF D+TL+EM +  P       Q+SGVG RK E Y   FL V+ +  
Sbjct: 531 FGLAQKENVPPYVIFSDNTLVEMAQYLPHDHDSFLQISGVGQRKAENYEDHFLPVIKSYA 590

Query: 604 GTD-EAPKVVLDLRH------------ELVSL--ARAGMTPAQIAGQLNCSEKNVYSLLA 648
                 PK  L  R             ELV+L   R G+   +IA     S   +   +A
Sbjct: 591 AEHLLKPKKKLSARKPSKSASTGLSKTELVTLQYQRDGLNVFEIAKAREMSLTTIEGHIA 650

Query: 649 EALGRQELSLDQAIDLPEDLMMEVQDAFLDGEGELPPVSAIAPQFGARVPEGVLYCVRAA 708
           + +  ++L  +    L +D ++ ++  +   EG    +  I   FG R      + ++ A
Sbjct: 651 KLVKLKKLEAETF--LSKDDLLNIRLFYRRQEGSF--LKPIKEHFGERYS---YFQIKVA 703

Query: 709 LAAE 712
           +A E
Sbjct: 704 IAEE 707