Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 725 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  488 bits (1256), Expect = e-142
 Identities = 255/596 (42%), Positives = 374/596 (62%), Gaps = 8/596 (1%)

Query: 9   LKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLIA 68
           LK IFG++ FRG Q AI++ +  G +  V+MPTG GKSLC+Q+P + + G  +V+SPLIA
Sbjct: 9   LKKIFGFNQFRGNQEAIVDNILQGNNTFVIMPTGAGKSLCYQLPAVTKEGTAIVISPLIA 68

Query: 69  LMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFLR 128
           LM +QV  L+  G++A  LNSTL+  +  ++   +  G  K+LY+APE L +   ++FL+
Sbjct: 69  LMKNQVDQLNAFGINAHFLNSTLSKTETNKVKKEVLSGATKLLYVAPESLTKEENVEFLK 128

Query: 129 DLDISLFAIDEAHCVSQWGHDFRPEYLQLGQ-LAELFPHVPRIALTATADMRTREEIVQR 187
              +S  AIDEAHC+S+WGHDFRPEY ++   +A++   +P IALTATA  + +++I + 
Sbjct: 129 SAQLSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDALPIIALTATATPKVQQDIQRN 188

Query: 188 LHLQGAERFLSSFDRPNIFYRIVP--KEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETA 245
           L+++ A+ F SSF+R N+FY + P  K   +K L+ ++  ++G +GI+YCLSRKKV+E A
Sbjct: 189 LNMEEADLFKSSFNRTNLFYEVRPKAKSDTKKHLIKYVKSQKGKSGIIYCLSRKKVEEIA 248

Query: 246 AFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDL 305
             L   G  A PYHAGL +  R  NQ  FLNEE  ++VATIAFGMGIDKP+VR+V H D+
Sbjct: 249 ELLKVNGINAAPYHAGLESAMRIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHYDV 308

Query: 306 PKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDAML 365
           PKSLE YYQETGRAGRDGL     M Y  +D+V L++  ++   +ER     +  L  M 
Sbjct: 309 PKSLEGYYQETGRAGRDGLEGHCLMFYKYEDIVKLEKFNKDKPVNEREN--AKVLLQEMA 366

Query: 366 ALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRYGV 425
           A  E + CRR+ LL YF E L + CG CDNC      +DA E    A+ AV  T QR+ +
Sbjct: 367 AYAESSVCRRRVLLHYFGESLNEDCGFCDNCKKKRDAFDAKEDILTAIEAVKETHQRFSL 426

Query: 426 GHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYGGL 485
            H+V+V+ G+  E + ++ H+ LSVFG GK   E  WRS+ RQ +  GL++ D+E YG +
Sbjct: 427 DHIVNVIRGEQNEYMESYNHDGLSVFGKGKEENERYWRSVIRQTMIHGLLEKDIENYGVI 486

Query: 486 RLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALRTLRRK 545
           +LS +    L+    +   +D       +   +      +   +A +  L+E L+  R+K
Sbjct: 487 KLSKTSEDFLKNPHEITFTKD---HDFDEMIENDEAEEIANTNKAYDEKLFELLKVERKK 543

Query: 546 LAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLNN 601
           +A+   +PPYVIF D +L EM    P S  ++AQV+GVG  K+ ++G  FL+++ N
Sbjct: 544 VAKSKGLPPYVIFQDPSLEEMATVYPTSREELAQVNGVGMGKVTKFGAPFLKLITN 599