Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

Subject, 602 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

 Score =  605 bits (1560), Expect = e-177
 Identities = 303/592 (51%), Positives = 414/592 (69%), Gaps = 4/592 (0%)

Query: 8   VLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLI 67
           +LK ++GYD+FRGRQ  II+ V  G +A VLMPTGGGKSLC+Q+P L R G+ +VVSPLI
Sbjct: 8   ILKAVYGYDAFRGRQGEIIQHVVAGNNAFVLMPTGGGKSLCYQIPALAREGMGLVVSPLI 67

Query: 68  ALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFL 127
           ALM DQVA L + GV A ALNS L+ E++R L   +R G V +LY APE L++P +LD L
Sbjct: 68  ALMVDQVAALRQAGVRAEALNSDLSPEERRTLWRDVRAGNVDILYAAPETLLKPDVLDAL 127

Query: 128 RDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEIVQR 187
           + +D+SL A+DEAHC+SQWGHDFRP Y QL  L   FP+ PR+ALTATAD  TR EI+  
Sbjct: 128 QSIDLSLIAVDEAHCLSQWGHDFRPPYRQLDMLIARFPNTPRMALTATADEPTRAEILGH 187

Query: 188 LHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETAAF 247
           L +  A+ F++ FDRPNI Y I+ K+ PR QL  FL  R   +GIVYCLS++KV+ETAA+
Sbjct: 188 LAIDEADAFIAGFDRPNIRYAIMEKDNPRTQLKRFLNGRENESGIVYCLSKRKVEETAAW 247

Query: 248 LCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPK 307
           L  +G  ALPYHAG+    R  NQ RF + E +I+VAT+AFGMGIDKP+VRFV H+DLP 
Sbjct: 248 LREEGRDALPYHAGMDKAAREENQTRFQHGEAVIIVATVAFGMGIDKPDVRFVVHIDLPG 307

Query: 308 SLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLDAMLAL 367
           S+EAYYQETGRAGRDGLPSD  M YG +D+ +  + ++ S+  ++ K +E+ KLDA+L L
Sbjct: 308 SIEAYYQETGRAGRDGLPSDVLMLYGYEDIALRNRFIEESDAADQRKYMERQKLDALLGL 367

Query: 368 CEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQRYGVGH 427
            E   CRRQ LL+YF +  E PCG+CD C      ++    A++ LS ++RTG+R+G  +
Sbjct: 368 AETAGCRRQVLLSYFGDRCE-PCGNCDTCSSPPDLFEGAIAAQKLLSCIYRTGERFGQAY 426

Query: 428 LVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGYGGLRL 487
           ++ VLLG   E++  FGH+ ++ +G+GK      WR++ RQLVA  L+++DL G+GGL +
Sbjct: 427 VISVLLGAQDERITKFGHDSITTYGIGKEHDNRTWRAILRQLVALRLIEVDLSGHGGLSI 486

Query: 488 SDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALRTLRRKLA 547
           S++ R  LR + +L LR    P++T + +  +  S A   +   +R L+EALR  R ++A
Sbjct: 487 SENGRRFLREKPSLMLRIPSAPRSTRRDAPRNAMSTA---LPEADRGLFEALRAKRMEIA 543

Query: 548 EEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVL 599
              +VPPYVIF D TL+E+  ++P S  +MAQ++GVG  KLERYG AFL+ +
Sbjct: 544 RAQNVPPYVIFHDKTLIELAAARPASAKEMAQIAGVGQTKLERYGPAFLDTI 595