Pairwise Alignments

Query, 296 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 305 a.a., putative membrane protein from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 7/233 (3%)

Query: 55  GPGWQRLSSQDARRLLLGGVLLAGHWVSFFIAVKVGGVAIAT-LGFASFPAFTVILESLL 113
           G  W  L+ ++  ++L  G  +A +   +F+ +   G A+ T +     P    ++  L 
Sbjct: 65  GGHWADLAGRERFQVLATGAAMALNVSCWFVGISHLGAALPTVISICCAPLIVALVSVLR 124

Query: 114 FRERIHRNEAVLVVLVSIGLILVTPAFD----LASEATGGLLWALLSGLLFSLLSLTNRA 169
             ER        ++L   G+ L+    D    LA     G+ W+L S   ++++ L N  
Sbjct: 125 GYERFGARLLAGLLLALAGVFLLVMPADGWGPLAPGHAAGVAWSLASAFCYAMVVLGNAR 184

Query: 170 GSGRLPAVQAALWQNLVVGLCLLPFAAP-GLA-DVAALDWLWIALLGIFCTGVAHSLFVA 227
              R+PAV A+ W   V  LC+L  A P G+        WL +   G+  T VA+  F  
Sbjct: 185 MPARVPAVTASAWGMTVAALCMLAVAWPRGITWPAGGAQWLGVGYTGVVTTSVAYLAFAW 244

Query: 228 SLAVIKARTAAVVFGMEPVYGIAVAWAVFAETPTVRMLLGGALIIFAIVLSSR 280
               +   +A +   +EP+    +A A+ AE    R   G  L+  A++L +R
Sbjct: 245 GARRLSPTSAVIGTLIEPLVAALLAAALLAEPMAPRQWAGALLLAGAMLLLAR 297