Pairwise Alignments

Query, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  144 bits (363), Expect = 1e-39
 Identities = 87/226 (38%), Positives = 129/226 (57%), Gaps = 8/226 (3%)

Query: 4   LLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSGLEL 63
           +L++DDD E+  L G +L + G  V A    +  R A+A      V+LD+MLP  SGL+L
Sbjct: 11  ILIVDDDAEIRRLAGKFLREHGHKVTAAQGAREMREAMAAGTVDLVILDIMLPGVSGLDL 70

Query: 64  LKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR---S 120
            + +R   + +P++ML+ARG  +DRI+GLELGADDYLAKP +PREL AR+ AVLRR   S
Sbjct: 71  CRDIRRT-SNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLRRTRLS 129

Query: 121 HPTATTSQMEL---GDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELA 177
            P A      L   G  + +  R + + +G  + L+  E  +L   L  P   L + +L 
Sbjct: 130 DPAAVNGGTCLTFSGWTLDTRRRELTNPEGAIVDLSTGEYDLLLTFLEHPQRVLTRDQLM 189

Query: 178 QIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGYYY 223
                R  T +DR++D+ VS LR+K+  H  G   +  +R  GY++
Sbjct: 190 DAAKNRIATGFDRAIDIQVSRLRRKLESHG-GPEMVKTVRGTGYFF 234