Pairwise Alignments

Query, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 1e-38
 Identities = 89/228 (39%), Positives = 134/228 (58%), Gaps = 13/228 (5%)

Query: 4   LLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSGLEL 63
           +LL+DDDQE+ ELL ++L++ GF VR   DG   R A+ E     V+LDVMLPD  G  L
Sbjct: 8   ILLVDDDQEIRELLQTYLSRAGFQVRGVPDGTGFRQAMNEAPCDLVILDVMLPDEDGFSL 67

Query: 64  LKQLRSE--HAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR-S 120
            + +R     A++P++ML+A  +  DR++GLELGADDY+ KP  PREL AR++A+LRR  
Sbjct: 68  CRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRRCQ 127

Query: 121 HPTATTSQMELGDLVYSPAR------GVASIDGREMTLTLSESRILEALLRQPGEPLDKQ 174
                +S  E+  LV+   R       +  +DG E+ L+ ++  +L+  L  P + LD+ 
Sbjct: 128 FGQERSSGGEV--LVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDRD 185

Query: 175 ELAQIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIV-ALRSRGY 221
            +     GR L   DR +DM VS LR+++    +  PR++  +R  GY
Sbjct: 186 TIGNATRGRDLMPLDRIVDMAVSRLRQRL-RDTEKPPRLIRTVRGSGY 232