Pairwise Alignments

Query, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  143 bits (361), Expect = 3e-39
 Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 9/232 (3%)

Query: 1   MSELLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSG 60
           +  ++++DDD+E+ EL+G++L + G       DG+  R  L   A   +VLD+M+P   G
Sbjct: 4   IDHIMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDG 63

Query: 61  LELLKQLRS-EHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR 119
           L L ++LR+ +H   P+LML+AR +  DRI+GLE+GADDYL KP   REL AR+ AVLRR
Sbjct: 64  LVLCRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRR 123

Query: 120 SH---PTATTSQ----MELGD-LVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPL 171
           +    P    S+    +  G   + + AR +    G  + L+  E R+L   +  P   L
Sbjct: 124 TRSLPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVL 183

Query: 172 DKQELAQIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGYYY 223
            + +L  +  GR   L+DRS+D+ VS LR+++   A     +  +RS GY +
Sbjct: 184 SRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVF 235