Pairwise Alignments

Query, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 4e-41
 Identities = 92/228 (40%), Positives = 136/228 (59%), Gaps = 10/228 (4%)

Query: 4   LLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPA-AVVLDVMLPDGSGLE 62
           +L++DDD+E+ ELL ++L + G  V A   G+  R AL E  P   ++LD+MLP   GL 
Sbjct: 9   ILIVDDDREIRELLTTYLVKNGLRVAAVPTGRHMRAALEESGPFDLIILDLMLPGEDGLT 68

Query: 63  LLKQLRS-EHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRS- 120
           L + LR+ ++   P+LML+AR E  DRILGLE+GADDYLAKP   REL AR+R+VLRR+ 
Sbjct: 69  LCRDLRTGKYKATPILMLTARSEEADRILGLEMGADDYLAKPFSARELLARIRSVLRRTR 128

Query: 121 ------HPTATTSQMELGD-LVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDK 173
                   T   S++  G+  V + AR +    G  + L+ +E R+L   L  P + L +
Sbjct: 129 MLPPNMRSTEAASKLAFGEWQVDTTARHLLDDSGVMVALSGAEYRLLRVFLDHPQKVLSR 188

Query: 174 QELAQIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGY 221
            +L  +  GR+  L++RS+D+ VS LR+++   A     I  +RS GY
Sbjct: 189 DQLLSLTQGREAELFERSIDLLVSRLRQRLRDDAREPRYIKTVRSEGY 236