Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 239 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  106 bits (265), Expect = 5e-28
 Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 19/240 (7%)

Query: 18  KLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHDAIAVDGKLIKRE--EAA 75
           ++ K ++  G+ SRR+ + W++ GR+ +NG   + G +    D + VDG+++K     A 
Sbjct: 2   RVNKYISEAGLCSRREADEWLAAGRVTINGEVVSTGAKALEGDEVRVDGEIVKARILAAT 61

Query: 76  EATRRV--IMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTT 133
            A ++   I  NKP G  CT D       + D +  P+  R   IGRLD ++ GL+L T+
Sbjct: 62  PAAKKAVYIALNKPVGVTCTTDQAVAG-NIVDFVDHPQ--RIFPIGRLDKDSEGLILLTS 118

Query: 134 DGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLE---DGPAKFTDIQKAPGG 190
           +G++ N ++      ++EY V V   V DE +  +  GV +      P +   I K    
Sbjct: 119 NGDIVNEILRAENHHEKEYLVAVNKAVTDEFLAGMAKGVRIHGQMTRPCRTRRIAKF--- 175

Query: 191 EGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGEI 250
            GF+     V+ +G NR++R +  + G  V++L+RVR   V L   L  G+WR +T+ E+
Sbjct: 176 -GFS----IVLTQGLNRQIRLMAAAFGYRVTQLRRVRIDNVKL-GHLKPGQWRNLTEAEL 229